Analysis of interatomic Contacts of Structural Units in PDB entry:
3IGR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3IGR entry

There are 2 chains in PDB entry 3IGR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2PRO 184
B
 ASP 2PRO 184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3IGR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 18Right-handed 310
Helix 2
2
A
19 30Right-handed alpha
Helix 3
3
A
30 35Right-handed alpha
Helix 4
4
A
42 46Right-handed 310
Helix 5
5
A
47 64Right-handed alpha
Helix 6
6
A
105 108Right-handed 310
Helix 7
7
A
111 127Right-handed alpha
Helix 8
8
A
141 151Right-handed alpha
Helix 9
9
B
16 18Right-handed 310
Helix 10
10
B
19 30Right-handed alpha
Helix 11
11
B
30 35Right-handed alpha
Helix 12
12
B
36 38Right-handed 310
Helix 13
13
B
42 46Right-handed 310
Helix 14
14
B
47 64Right-handed alpha
Helix 15
15
B
111 127Right-handed alpha
Helix 16
16
B
141 151Right-handed alpha
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There are 2 sheets in PDB entry 3IGR. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
10 14anti-parallel
Strand 3
A
68 74anti-parallel
Strand 4
A
79 90anti-parallel
Strand 5
A
96 103anti-parallel
Strand 6
A
132 137parallel
Strand 7
A
168 178anti-parallel
Strand 8
A
154 165anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
10 14anti-parallel
Strand 3
B
68 74anti-parallel
Strand 4
B
79 90anti-parallel
Strand 5
B
96 103anti-parallel
Strand 6
B
132 137parallel
Strand 7
B
168 178anti-parallel
Strand 8
B
154 165anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il