Analysis of interatomic Contacts of Structural Units in PDB entry:
3II0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3II0 entry

There are 4 chains in PDB entry 3II0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 15GLN 419
B
 PRO 15GLN 419
C
 MET 13GLN 419
D
 MET 13GLN 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 3II0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 28Right-handed alpha
Helix 2
2
A
51 63Right-handed alpha
Helix 3
3
A
77 90Right-handed alpha
Helix 4
4
A
93 98Right-handed alpha
Helix 5
5
A
108 124Right-handed alpha
Helix 6
6
A
142 151Right-handed alpha
Helix 7
7
A
170 180Right-handed alpha
Helix 8
8
A
202 217Right-handed alpha
Helix 9
9
A
233 238Right-handed alpha
Helix 10
10
A
238 247Right-handed alpha
Helix 11
11
A
263 266Right-handed 310
Helix 12
12
A
277 294Right-handed alpha
Helix 13
13
A
301 312Right-handed alpha
Helix 14
14
A
313 345Right-handed alpha
Helix 15
15
A
351 357Right-handed alpha
Helix 16
16
A
367 379Right-handed alpha
Helix 17
17
A
391 393Right-handed 310
Helix 18
18
A
397 412Right-handed alpha
Helix 19
19
B
16 28Right-handed alpha
Helix 20
20
B
51 64Right-handed alpha
Helix 21
21
B
77 90Right-handed alpha
Helix 22
22
B
93 98Right-handed alpha
Helix 23
23
B
108 124Right-handed alpha
Helix 24
24
B
142 151Right-handed alpha
Helix 25
25
B
170 180Right-handed alpha
Helix 26
26
B
202 217Right-handed alpha
Helix 27
27
B
233 238Right-handed alpha
Helix 28
28
B
238 247Right-handed alpha
Helix 29
29
B
263 266Right-handed 310
Helix 30
30
B
277 294Right-handed alpha
Helix 31
31
B
301 312Right-handed alpha
Helix 32
32
B
313 345Right-handed alpha
Helix 33
33
B
351 357Right-handed alpha
Helix 34
34
B
367 379Right-handed alpha
Helix 35
35
B
391 393Right-handed 310
Helix 36
36
B
397 412Right-handed alpha
Helix 37
37
C
16 28Right-handed alpha
Helix 38
38
C
51 63Right-handed alpha
Helix 39
39
C
77 90Right-handed alpha
Helix 40
40
C
93 98Right-handed alpha
Helix 41
41
C
108 124Right-handed alpha
Helix 42
42
C
142 152Right-handed alpha
Helix 43
43
C
170 180Right-handed alpha
Helix 44
44
C
202 217Right-handed alpha
Helix 45
45
C
233 238Right-handed alpha
Helix 46
46
C
238 247Right-handed alpha
Helix 47
47
C
263 266Right-handed 310
Helix 48
48
C
277 294Right-handed alpha
Helix 49
49
C
301 312Right-handed alpha
Helix 50
50
C
313 345Right-handed alpha
Helix 51
51
C
351 357Right-handed alpha
Helix 52
52
C
367 379Right-handed alpha
Helix 53
53
C
391 393Right-handed 310
Helix 54
54
C
397 412Right-handed alpha
Helix 55
55
D
16 28Right-handed alpha
Helix 56
56
D
51 64Right-handed alpha
Helix 57
57
D
77 90Right-handed alpha
Helix 58
58
D
93 98Right-handed alpha
Helix 59
59
D
108 124Right-handed alpha
Helix 60
60
D
142 152Right-handed alpha
Helix 61
61
D
170 180Right-handed alpha
Helix 62
62
D
202 216Right-handed alpha
Helix 63
63
D
233 238Right-handed alpha
Helix 64
64
D
238 247Right-handed alpha
Helix 65
65
D
263 266Right-handed 310
Helix 66
66
D
277 294Right-handed alpha
Helix 67
67
D
301 313Right-handed alpha
Helix 68
68
D
313 345Right-handed alpha
Helix 69
69
D
351 357Right-handed alpha
Helix 70
70
D
367 377Right-handed alpha
Helix 71
71
D
391 393Right-handed 310
Helix 72
72
D
397 412Right-handed alpha
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There are 16 sheets in PDB entry 3II0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
380 381parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 107first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
251 256anti-parallel
Strand 4
A
219 224parallel
Strand 5
A
186 190parallel
Strand 6
A
134 138parallel
Strand 7
A
156 160parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
168 169anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 363first strand
Strand 2
A
387 389anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
380 381parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 107first strand
Strand 2
B
268 274anti-parallel
Strand 3
B
251 256anti-parallel
Strand 4
B
219 224parallel
Strand 5
B
186 190parallel
Strand 6
B
134 138parallel
Strand 7
B
156 160parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
168 169anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
361 363first strand
Strand 2
B
387 389anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 35first strand
Strand 2
C
380 381parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 107first strand
Strand 2
C
268 274anti-parallel
Strand 3
C
251 256anti-parallel
Strand 4
C
219 224parallel
Strand 5
C
186 190parallel
Strand 6
C
134 138parallel
Strand 7
C
156 160parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 163first strand
Strand 2
C
168 169anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
361 363first strand
Strand 2
C
387 389anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 35first strand
Strand 2
D
380 381parallel
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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
101 107first strand
Strand 2
D
268 274anti-parallel
Strand 3
D
251 256anti-parallel
Strand 4
D
219 224parallel
Strand 5
D
186 190parallel
Strand 6
D
134 138parallel
Strand 7
D
156 160parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
162 163first strand
Strand 2
D
168 169anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
361 363first strand
Strand 2
D
387 389anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il