Analysis of interatomic Contacts of Structural Units in PDB entry:
3INK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3INK entry

There are 2 chains in PDB entry 3INK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 SER 6THR 133
D
 SER 6THR 133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3INK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
6 29Right-handed alpha
Helix 2
2
C
35 40Right-handed alpha
Helix 3
3
C
52 55Right-handed 310
Helix 4
4
C
56 61Right-handed alpha
Helix 5
5
C
62 71Right-handed alpha
Helix 6
6
C
72 73Right-handed 310
Helix 7
7
C
74 78Right-handed 310
Helix 8
8
C
81 97Right-handed alpha
Helix 9
9
C
113 130Right-handed alpha
Helix 10
10
D
6 29Right-handed alpha
Helix 11
11
D
35 40Right-handed alpha
Helix 12
12
D
52 55Right-handed 310
Helix 13
13
D
56 61Right-handed alpha
Helix 14
14
D
62 71Right-handed alpha
Helix 15
15
D
72 73Right-handed 310
Helix 16
16
D
74 78Right-handed 310
Helix 17
17
D
81 97Right-handed alpha
Helix 18
18
D
113 133Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3INK.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 47first strand
Strand 2
C
107 112anti-parallel
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