Analysis of interatomic Contacts of Structural Units in PDB entry:
3IQX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3IQX entry

There are 2 chains in PDB entry 3IQX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13PRO 338
B
 SER 13PRO 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3IQX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 24Right-handed alpha
Helix 2
2
A
39 52Right-handed alpha
Helix 3
3
A
53 55Right-handed 310
Helix 4
4
A
67 74Right-handed alpha
Helix 5
5
A
130 146Right-handed alpha
Helix 6
6
A
159 173Right-handed alpha
Helix 7
7
A
213 230Right-handed alpha
Helix 8
8
A
243 260Right-handed alpha
Helix 9
9
A
281 303Right-handed alpha
Helix 10
10
A
319 333Right-handed alpha
Helix 11
11
B
18 24Right-handed alpha
Helix 12
12
B
39 52Right-handed alpha
Helix 13
13
B
53 55Right-handed 310
Helix 14
14
B
68 74Right-handed alpha
Helix 15
15
B
134 147Right-handed alpha
Helix 16
16
B
159 174Right-handed alpha
Helix 17
17
B
211 230Right-handed alpha
Helix 18
18
B
243 260Right-handed alpha
Helix 19
19
B
281 303Right-handed alpha
Helix 20
20
B
319 333Right-handed alpha
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There are 2 sheets in PDB entry 3IQX. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
A
58 62parallel
Strand 3
A
152 156parallel
Strand 4
A
29 33parallel
Strand 5
A
234 240parallel
Strand 6
A
264 272parallel
Strand 7
A
307 312parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 94first strand
Strand 2
B
58 62parallel
Strand 3
B
152 156parallel
Strand 4
B
29 33parallel
Strand 5
B
234 240parallel
Strand 6
B
263 272parallel
Strand 7
B
307 312parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il