Analysis of interatomic Contacts of Structural Units in PDB entry:
3IQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3IQY entry

There is 1 chain in PDB entry 3IQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 802
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3IQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 9Right-handed 310
Helix 2
2
A
10 29Right-handed alpha
Helix 3
3
A
29 35Right-handed alpha
Helix 4
4
A
37 54Right-handed alpha
Helix 5
5
A
61 77Right-handed alpha
Helix 6
6
A
82 94Right-handed alpha
Helix 7
7
A
105 118Right-handed alpha
Helix 8
8
A
130 148Right-handed alpha
Helix 9
9
A
160 168Right-handed alpha
Helix 10
10
A
177 187Right-handed alpha
Helix 11
11
A
192 196Right-handed 310
Helix 12
12
A
208 214Right-handed alpha
Helix 13
13
A
215 218Right-handed 310
Helix 14
14
A
230 243Right-handed alpha
Helix 15
15
A
262 269Right-handed alpha
Helix 16
16
A
284 299Right-handed alpha
Helix 17
17
A
332 341Right-handed alpha
Helix 18
18
A
356 362Right-handed alpha
Helix 19
19
A
374 376Right-handed 310
Helix 20
20
A
377 386Right-handed alpha
Helix 21
21
A
410 429Right-handed alpha
Helix 22
22
A
438 451Right-handed alpha
Helix 23
23
A
463 473Right-handed alpha
Helix 24
24
A
515 524Right-handed alpha
Helix 25
25
A
543 548Right-handed alpha
Helix 26
26
A
551 560Right-handed alpha
Helix 27
27
A
571 619Right-handed alpha
Helix 28
28
A
623 643Right-handed alpha
Helix 29
29
A
653 665Right-handed alpha
Helix 30
30
A
672 677Right-handed 310
Helix 31
31
A
680 703Right-handed alpha
Helix 32
32
A
707 738Right-handed alpha
Helix 33
33
A
747 778Right-handed alpha
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There are 6 sheets in PDB entry 3IQY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 207first strand
Strand 2
A
366 371parallel
Strand 3
A
97 99parallel
Strand 4
A
389 391parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
172 176parallel
Strand 3
A
152 154parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 355first strand
Strand 2
A
221 225anti-parallel
Strand 3
A
795 797anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 308first strand
Strand 2
A
313 315anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 402first strand
Strand 2
A
532 540parallel
Strand 3
A
406 408parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 402first strand
Strand 2
A
532 540parallel
Strand 3
A
505 509parallel
Strand 4
A
432 436parallel
Strand 5
A
480 484parallel
Strand 6
A
457 459parallel
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