Analysis of interatomic Contacts of Structural Units in PDB entry:
3ITE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ITE entry

There are 2 chains in PDB entry 3ITE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13ASP 422
B
 THR 12PHE 536
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3ITE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 28Right-handed alpha
Helix 2
2
A
53 70Right-handed alpha
Helix 3
3
A
84 97Right-handed alpha
Helix 4
4
A
109 121Right-handed alpha
Helix 5
5
A
148 158Right-handed alpha
Helix 6
6
A
192 210Right-handed alpha
Helix 7
7
A
211 216Right-handed 310
Helix 8
8
A
231 243Right-handed alpha
Helix 9
9
A
251 258Right-handed alpha
Helix 10
10
A
258 266Right-handed alpha
Helix 11
11
A
274 282Right-handed alpha
Helix 12
12
A
284 288Right-handed 310
Helix 13
13
A
302 310Right-handed alpha
Helix 14
14
A
323 327Right-handed 310
Helix 15
15
B
18 28Right-handed alpha
Helix 16
16
B
53 70Right-handed alpha
Helix 17
17
B
84 97Right-handed alpha
Helix 18
18
B
109 121Right-handed alpha
Helix 19
19
B
148 156Right-handed alpha
Helix 20
20
B
192 210Right-handed alpha
Helix 21
21
B
211 216Right-handed 310
Helix 22
22
B
231 243Right-handed alpha
Helix 23
23
B
251 258Right-handed alpha
Helix 24
24
B
258 266Right-handed alpha
Helix 25
25
B
274 282Right-handed alpha
Helix 26
26
B
284 288Right-handed 310
Helix 27
27
B
302 310Right-handed alpha
Helix 28
28
B
323 327Right-handed 310
Helix 29
29
B
433 445Right-handed alpha
Helix 30
30
B
490 502Right-handed alpha
Helix 31
31
B
504 508Right-handed 310
Helix 32
32
B
528 535Right-handed alpha
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There are 11 sheets in PDB entry 3ITE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
32 38anti-parallel
Strand 3
A
246 249parallel
Strand 4
A
221 223parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 103first strand
Strand 2
A
76 80parallel
Strand 3
A
124 127parallel
Strand 4
A
142 145parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 178first strand
Strand 2
A
186 191anti-parallel
Strand 3
A
382 383anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
293 297parallel
Strand 3
A
316 321parallel
Strand 4
A
331 334anti-parallel
Strand 5
A
343 347anti-parallel
Strand 6
A
415 420anti-parallel
Strand 7
A
398 409anti-parallel
Strand 8
A
370 375anti-parallel
Strand 9
A
352 356anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
293 297parallel
Strand 3
A
316 321parallel
Strand 4
A
331 334anti-parallel
Strand 5
A
343 347anti-parallel
Strand 6
A
415 420anti-parallel
Strand 7
A
398 409anti-parallel
Strand 8
A
392 395anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 52first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
246 249parallel
Strand 4
B
221 223parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 103first strand
Strand 2
B
76 80parallel
Strand 3
B
124 127parallel
Strand 4
B
142 145parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 178first strand
Strand 2
B
186 191anti-parallel
Strand 3
B
382 383anti-parallel
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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 273first strand
Strand 2
B
293 297parallel
Strand 3
B
316 321parallel
Strand 4
B
331 334anti-parallel
Strand 5
B
343 347anti-parallel
Strand 6
B
415 420anti-parallel
Strand 7
B
398 409anti-parallel
Strand 8
B
369 375anti-parallel
Strand 9
B
352 356anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 273first strand
Strand 2
B
293 297parallel
Strand 3
B
316 321parallel
Strand 4
B
331 334anti-parallel
Strand 5
B
343 347anti-parallel
Strand 6
B
415 420anti-parallel
Strand 7
B
398 409anti-parallel
Strand 8
B
392 395anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
449 454first strand
Strand 2
B
467 472anti-parallel
Strand 3
B
512 514parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il