Analysis of interatomic Contacts of Structural Units in PDB entry:
3J2Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3J2Z entry

There are 8 chains in PDB entry 3J2Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 1	GLU 212
C	GLN 1001	GLU 1212
E	GLN 2001	GLU 2212
G	GLN 3001	GLU 3212
B	GLN 1	ARG 218
D	GLN 1001	ARG 1218
F	GLN 2001	ARG 2218
H	GLN 3001	ARG 3218

There are 20 helices in PDB entry 3J2Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	78	82	Right-handed 310
Helix 2	2	A	120	127	Right-handed alpha
Helix 3	3	A	182	188	Right-handed alpha
Helix 4	4	C	1078	1082	Right-handed 310
Helix 5	5	C	1120	1127	Right-handed alpha
Helix 6	6	C	1182	1188	Right-handed alpha
Helix 7	7	E	2078	2082	Right-handed 310
Helix 8	8	E	2120	2127	Right-handed alpha
Helix 9	9	E	2182	2188	Right-handed alpha
Helix 10	10	G	3078	3082	Right-handed 310
Helix 11	11	G	3120	3127	Right-handed alpha
Helix 12	12	G	3182	3188	Right-handed alpha
Helix 13	13	B	62	65	Right-handed 310
Helix 14	14	B	161	163	Right-handed 310
Helix 15	15	D	1062	1065	Right-handed 310
Helix 16	16	D	1161	1163	Right-handed 310
Helix 17	17	F	2062	2065	Right-handed 310
Helix 18	18	F	2161	2163	Right-handed 310
Helix 19	19	H	3062	3065	Right-handed 310
Helix 20	20	H	3161	3163	Right-handed 310

There are 36 sheets in PDB entry 3J2Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	7	first strand
Strand 2	A	19	29	anti-parallel
Strand 3	A	61	74	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	101	105	parallel
Strand 3	A	84	89	anti-parallel
Strand 4	A	32	37	anti-parallel
Strand 5	A	44	48	anti-parallel
Strand 6	A	52	53	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	117	first strand
Strand 2	A	128	138	anti-parallel
Strand 3	A	172	181	anti-parallel
Strand 4	A	158	162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	154	first strand
Strand 2	A	143	149	anti-parallel
Strand 3	A	190	197	anti-parallel
Strand 4	A	204	209	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1004	1007	first strand
Strand 2	C	1019	1029	anti-parallel
Strand 3	C	1061	1074	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1010	1013	first strand
Strand 2	C	1101	1105	parallel
Strand 3	C	1084	1089	anti-parallel
Strand 4	C	1032	1037	anti-parallel
Strand 5	C	1044	1048	anti-parallel
Strand 6	C	1052	1053	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1113	1117	first strand
Strand 2	C	1128	1138	anti-parallel
Strand 3	C	1172	1181	anti-parallel
Strand 4	C	1158	1162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1152	1154	first strand
Strand 2	C	1143	1149	anti-parallel
Strand 3	C	1190	1197	anti-parallel
Strand 4	C	1204	1209	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2004	2007	first strand
Strand 2	E	2019	2029	anti-parallel
Strand 3	E	2061	2074	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2010	2013	first strand
Strand 2	E	2101	2105	parallel
Strand 3	E	2084	2089	anti-parallel
Strand 4	E	2032	2037	anti-parallel
Strand 5	E	2044	2048	anti-parallel
Strand 6	E	2052	2053	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2113	2117	first strand
Strand 2	E	2128	2138	anti-parallel
Strand 3	E	2172	2181	anti-parallel
Strand 4	E	2158	2162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2152	2154	first strand
Strand 2	E	2143	2149	anti-parallel
Strand 3	E	2190	2197	anti-parallel
Strand 4	E	2204	2209	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3004	3007	first strand
Strand 2	G	3019	3029	anti-parallel
Strand 3	G	3061	3074	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3010	3013	first strand
Strand 2	G	3101	3105	parallel
Strand 3	G	3084	3089	anti-parallel
Strand 4	G	3032	3037	anti-parallel
Strand 5	G	3044	3048	anti-parallel
Strand 6	G	3052	3053	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3113	3117	first strand
Strand 2	G	3128	3138	anti-parallel
Strand 3	G	3172	3181	anti-parallel
Strand 4	G	3158	3162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3152	3154	first strand
Strand 2	G	3143	3149	anti-parallel
Strand 3	G	3190	3197	anti-parallel
Strand 4	G	3204	3209	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	5	first strand
Strand 2	B	23	25	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	12	first strand
Strand 2	B	112	116	parallel
Strand 3	B	92	99	anti-parallel
Strand 4	B	33	40	anti-parallel
Strand 5	B	44	52	anti-parallel
Strand 6	B	57	60	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	20	first strand
Strand 2	B	79	83	anti-parallel
Strand 3	B	68	72	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	129	first strand
Strand 2	B	140	150	anti-parallel
Strand 3	B	179	189	anti-parallel
Strand 4	B	168	176	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	159	first strand
Strand 2	B	199	204	anti-parallel
Strand 3	B	209	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1003	1005	first strand
Strand 2	D	1023	1025	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1009	1012	first strand
Strand 2	D	1112	1116	parallel
Strand 3	D	1092	1099	anti-parallel
Strand 4	D	1033	1040	anti-parallel
Strand 5	D	1044	1052	anti-parallel
Strand 6	D	1057	1060	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1018	1020	first strand
Strand 2	D	1079	1083	anti-parallel
Strand 3	D	1068	1072	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1127	1129	first strand
Strand 2	D	1140	1150	anti-parallel
Strand 3	D	1179	1189	anti-parallel
Strand 4	D	1168	1176	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1156	1159	first strand
Strand 2	D	1199	1204	anti-parallel
Strand 3	D	1209	1214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2003	2005	first strand
Strand 2	F	2023	2025	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2009	2012	first strand
Strand 2	F	2112	2116	parallel
Strand 3	F	2092	2099	anti-parallel
Strand 4	F	2033	2040	anti-parallel
Strand 5	F	2044	2052	anti-parallel
Strand 6	F	2057	2060	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2018	2020	first strand
Strand 2	F	2079	2083	anti-parallel
Strand 3	F	2068	2072	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2127	2129	first strand
Strand 2	F	2140	2150	anti-parallel
Strand 3	F	2179	2189	anti-parallel
Strand 4	F	2168	2176	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2156	2159	first strand
Strand 2	F	2199	2204	anti-parallel
Strand 3	F	2209	2214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3003	3005	first strand
Strand 2	H	3023	3025	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3009	3012	first strand
Strand 2	H	3112	3116	parallel
Strand 3	H	3092	3099	anti-parallel
Strand 4	H	3033	3040	anti-parallel
Strand 5	H	3044	3052	anti-parallel
Strand 6	H	3057	3060	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3018	3020	first strand
Strand 2	H	3079	3083	anti-parallel
Strand 3	H	3068	3072	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3127	3129	first strand
Strand 2	H	3140	3150	anti-parallel
Strand 3	H	3179	3189	anti-parallel
Strand 4	H	3168	3176	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3156	3159	first strand
Strand 2	H	3199	3204	anti-parallel
Strand 3	H	3209	3214	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3J2Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
3J2Z