Analysis of interatomic Contacts of Structural Units in PDB entry:
3J31


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3J31 entry

There are 18 chains in PDB entry 3J31 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
Q
 GLU 3VAL 222
R
 UNK 1UNK 15
A
 GLY 2ARG 345
B
 GLY 2ARG 345
C
 GLY 2ARG 345
D
 GLY 2ARG 345
E
 GLY 2ARG 345
F
 GLY 2ARG 345
G
 GLY 2ARG 345
H
 GLY 2ARG 345
I
 GLY 2ARG 345
J
 GLY 2ARG 345
K
 GLY 2ARG 345
L
 GLY 2ARG 345
M
 GLY 2ARG 345
N
 GLY 2ARG 345
O
 GLY 2ARG 345
P
 GLY 7SER 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are107 helices in PDB entry 3J31. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
58 62Right-handed 310
Helix 2
2
A
80 91Right-handed alpha
Helix 3
3
A
161 167Right-handed alpha
Helix 4
4
A
250 263Right-handed alpha
Helix 5
5
A
277 279Right-handed 310
Helix 6
6
A
317 323Right-handed alpha
Helix 7
7
A
327 341Right-handed alpha
Helix 8
8
B
58 62Right-handed 310
Helix 9
9
B
80 91Right-handed alpha
Helix 10
10
B
161 167Right-handed alpha
Helix 11
11
B
250 263Right-handed alpha
Helix 12
12
B
277 279Right-handed 310
Helix 13
13
B
317 323Right-handed alpha
Helix 14
14
B
325 343Right-handed alpha
Helix 15
15
C
58 62Right-handed 310
Helix 16
16
C
79 91Right-handed alpha
Helix 17
17
C
161 167Right-handed alpha
Helix 18
18
C
250 263Right-handed alpha
Helix 19
19
C
277 279Right-handed 310
Helix 20
20
C
317 323Right-handed alpha
Helix 21
21
C
327 343Right-handed alpha
Helix 22
22
D
58 60Right-handed 310
Helix 23
23
D
79 91Right-handed alpha
Helix 24
24
D
161 167Right-handed alpha
Helix 25
25
D
250 263Right-handed alpha
Helix 26
26
D
277 279Right-handed 310
Helix 27
27
D
317 323Right-handed alpha
Helix 28
28
D
328 343Right-handed alpha
Helix 29
29
E
58 62Right-handed 310
Helix 30
30
E
79 91Right-handed alpha
Helix 31
31
E
161 167Right-handed alpha
Helix 32
32
E
250 263Right-handed alpha
Helix 33
33
E
277 279Right-handed 310
Helix 34
34
E
317 323Right-handed alpha
Helix 35
35
E
325 343Right-handed alpha
Helix 36
36
F
58 62Right-handed 310
Helix 37
37
F
79 91Right-handed alpha
Helix 38
38
F
161 167Right-handed alpha
Helix 39
39
F
250 263Right-handed alpha
Helix 40
40
F
277 279Right-handed 310
Helix 41
41
F
317 323Right-handed alpha
Helix 42
42
F
327 343Right-handed alpha
Helix 43
43
G
58 62Right-handed 310
Helix 44
44
G
79 91Right-handed alpha
Helix 45
45
G
161 167Right-handed alpha
Helix 46
46
G
250 263Right-handed alpha
Helix 47
47
G
277 279Right-handed 310
Helix 48
48
G
317 323Right-handed alpha
Helix 49
49
G
328 343Right-handed alpha
Helix 50
50
H
58 62Right-handed 310
Helix 51
51
H
79 90Right-handed alpha
Helix 52
52
H
161 167Right-handed alpha
Helix 53
53
H
250 255Right-handed alpha
Helix 54
54
H
255 263Right-handed alpha
Helix 55
55
H
277 279Right-handed 310
Helix 56
56
H
317 323Right-handed alpha
Helix 57
57
H
325 343Right-handed alpha
Helix 58
58
I
58 62Right-handed 310
Helix 59
59
I
80 91Right-handed alpha
Helix 60
60
I
161 167Right-handed alpha
Helix 61
61
I
250 263Right-handed alpha
Helix 62
62
I
277 279Right-handed 310
Helix 63
63
I
317 323Right-handed alpha
Helix 64
64
I
327 343Right-handed alpha
Helix 65
65
J
58 62Right-handed 310
Helix 66
66
J
80 91Right-handed alpha
Helix 67
67
J
161 167Right-handed alpha
Helix 68
68
J
250 263Right-handed alpha
Helix 69
69
J
277 279Right-handed 310
Helix 70
70
J
317 323Right-handed alpha
Helix 71
71
J
327 343Right-handed alpha
Helix 72
72
K
58 62Right-handed 310
Helix 73
73
K
80 91Right-handed alpha
Helix 74
74
K
161 167Right-handed alpha
Helix 75
75
K
250 263Right-handed alpha
Helix 76
76
K
277 279Right-handed 310
Helix 77
77
K
325 343Right-handed alpha
Helix 78
78
L
58 62Right-handed 310
Helix 79
79
L
79 91Right-handed alpha
Helix 80
80
L
161 167Right-handed alpha
Helix 81
81
L
250 263Right-handed alpha
Helix 82
82
L
277 279Right-handed 310
Helix 83
83
L
317 323Right-handed alpha
Helix 84
84
L
325 343Right-handed alpha
Helix 85
85
M
58 62Right-handed 310
Helix 86
86
M
80 91Right-handed alpha
Helix 87
87
M
161 167Right-handed alpha
Helix 88
88
M
250 263Right-handed alpha
Helix 89
89
M
277 279Right-handed 310
Helix 90
90
M
317 323Right-handed alpha
Helix 91
91
M
327 343Right-handed alpha
Helix 92
92
N
58 62Right-handed 310
Helix 93
93
N
80 91Right-handed alpha
Helix 94
94
N
161 167Right-handed alpha
Helix 95
95
N
250 263Right-handed alpha
Helix 96
96
N
277 279Right-handed 310
Helix 97
97
N
317 323Right-handed alpha
Helix 98
98
N
325 341Right-handed alpha
Helix 99
99
O
58 62Right-handed 310
Helix 100
100
O
79 91Right-handed alpha
Helix 101
101
O
161 167Right-handed alpha
Helix 102
102
O
250 263Right-handed alpha
Helix 103
103
O
277 279Right-handed 310
Helix 104
104
O
317 323Right-handed alpha
Helix 105
105
O
325 343Right-handed alpha
Helix 106
106
P
24 32Right-handed alpha
Helix 107
107
P
333 337Right-handed alpha
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