Analysis of interatomic Contacts of Structural Units in PDB entry:
3J7H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3J7H entry

There are 4 chains in PDB entry 3J7H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 2	LYS 1023
B	MET 2	LYS 1023
C	MET 2	LYS 1023
D	MET 2	LYS 1023

There are 76 helices in PDB entry 3J7H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	6	12	Right-handed alpha
Helix 2	2	A	38	45	Right-handed alpha
Helix 3	3	A	70	75	Right-handed 310
Helix 4	4	A	89	94	Right-handed alpha
Helix 5	5	A	130	136	Right-handed alpha
Helix 6	6	A	192	197	Right-handed 310
Helix 7	7	A	368	382	Right-handed alpha
Helix 8	8	A	395	406	Right-handed alpha
Helix 9	9	A	424	429	Right-handed alpha
Helix 10	10	A	432	448	Right-handed alpha
Helix 11	11	A	465	479	Right-handed alpha
Helix 12	12	A	519	526	Right-handed alpha
Helix 13	13	A	548	559	Right-handed alpha
Helix 14	14	A	598	603	Right-handed 310
Helix 15	15	A	614	625	Right-handed alpha
Helix 16	16	A	789	794	Right-handed alpha
Helix 17	17	A	805	814	Right-handed alpha
Helix 18	18	A	922	926	Right-handed alpha
Helix 19	19	A	963	970	Right-handed alpha
Helix 20	20	B	6	12	Right-handed alpha
Helix 21	21	B	38	45	Right-handed alpha
Helix 22	22	B	70	75	Right-handed 310
Helix 23	23	B	89	94	Right-handed alpha
Helix 24	24	B	130	136	Right-handed alpha
Helix 25	25	B	192	197	Right-handed 310
Helix 26	26	B	368	382	Right-handed alpha
Helix 27	27	B	395	406	Right-handed alpha
Helix 28	28	B	424	429	Right-handed alpha
Helix 29	29	B	432	448	Right-handed alpha
Helix 30	30	B	465	479	Right-handed alpha
Helix 31	31	B	519	526	Right-handed alpha
Helix 32	32	B	548	559	Right-handed alpha
Helix 33	33	B	598	603	Right-handed 310
Helix 34	34	B	614	625	Right-handed alpha
Helix 35	35	B	789	794	Right-handed alpha
Helix 36	36	B	805	814	Right-handed alpha
Helix 37	37	B	922	926	Right-handed alpha
Helix 38	38	B	963	970	Right-handed alpha
Helix 39	39	C	6	12	Right-handed alpha
Helix 40	40	C	38	45	Right-handed alpha
Helix 41	41	C	70	75	Right-handed 310
Helix 42	42	C	89	94	Right-handed alpha
Helix 43	43	C	130	136	Right-handed alpha
Helix 44	44	C	192	197	Right-handed 310
Helix 45	45	C	368	382	Right-handed alpha
Helix 46	46	C	395	406	Right-handed alpha
Helix 47	47	C	424	429	Right-handed alpha
Helix 48	48	C	432	448	Right-handed alpha
Helix 49	49	C	465	479	Right-handed alpha
Helix 50	50	C	519	526	Right-handed alpha
Helix 51	51	C	548	559	Right-handed alpha
Helix 52	52	C	598	603	Right-handed 310
Helix 53	53	C	614	625	Right-handed alpha
Helix 54	54	C	789	794	Right-handed alpha
Helix 55	55	C	805	814	Right-handed alpha
Helix 56	56	C	922	926	Right-handed alpha
Helix 57	57	C	963	970	Right-handed alpha
Helix 58	58	D	6	12	Right-handed alpha
Helix 59	59	D	38	45	Right-handed alpha
Helix 60	60	D	70	75	Right-handed 310
Helix 61	61	D	89	94	Right-handed alpha
Helix 62	62	D	130	136	Right-handed alpha
Helix 63	63	D	192	197	Right-handed 310
Helix 64	64	D	368	382	Right-handed alpha
Helix 65	65	D	395	406	Right-handed alpha
Helix 66	66	D	424	429	Right-handed alpha
Helix 67	67	D	432	448	Right-handed alpha
Helix 68	68	D	465	479	Right-handed alpha
Helix 69	69	D	519	526	Right-handed alpha
Helix 70	70	D	548	559	Right-handed alpha
Helix 71	71	D	598	603	Right-handed 310
Helix 72	72	D	614	625	Right-handed alpha
Helix 73	73	D	789	794	Right-handed alpha
Helix 74	74	D	805	814	Right-handed alpha
Helix 75	75	D	922	926	Right-handed alpha
Helix 76	76	D	963	970	Right-handed alpha

There are 52 sheets in PDB entry 3J7H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	53	first strand
Strand 2	A	212	217	anti-parallel
Strand 3	A	138	143	anti-parallel
Strand 4	A	169	172	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	86	first strand
Strand 2	A	56	63	anti-parallel
Strand 3	A	120	129	anti-parallel
Strand 4	A	180	189	anti-parallel
Strand 5	A	149	154	anti-parallel
Strand 6	A	157	162	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	231	first strand
Strand 2	A	237	246	anti-parallel
Strand 3	A	288	296	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	273	first strand
Strand 2	A	255	262	anti-parallel
Strand 3	A	308	316	anti-parallel
Strand 4	A	322	331	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	335	338	first strand
Strand 2	A	341	344	anti-parallel
Strand 3	A	347	348	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	457	first strand
Strand 2	A	408	412	parallel
Strand 3	A	386	389	parallel
Strand 4	A	353	356	parallel
Strand 5	A	566	567	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	512	first strand
Strand 2	A	515	516	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	575	578	first strand
Strand 2	A	584	587	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	628	632	first strand
Strand 2	A	635	639	anti-parallel
Strand 3	A	677	681	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	661	670	first strand
Strand 2	A	650	658	anti-parallel
Strand 3	A	692	701	anti-parallel
Strand 4	A	714	725	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	739	742	first strand
Strand 2	A	746	751	anti-parallel
Strand 3	A	754	759	anti-parallel
Strand 4	A	767	770	anti-parallel
Strand 5	A	773	774	anti-parallel

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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	776	783	first strand
Strand 2	A	881	888	anti-parallel
Strand 3	A	982	990	anti-parallel
Strand 4	A	949	960	anti-parallel
Strand 5	A	1013	1022	anti-parallel
Strand 6	A	864	872	anti-parallel
Strand 7	A	847	858	anti-parallel
Strand 8	A	834	844	anti-parallel
Strand 9	A	819	829	anti-parallel

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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	776	783	first strand
Strand 2	A	881	888	anti-parallel
Strand 3	A	982	990	anti-parallel
Strand 4	A	949	960	anti-parallel
Strand 5	A	938	946	anti-parallel
Strand 6	A	894	901	anti-parallel
Strand 7	A	914	921	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	53	first strand
Strand 2	B	212	217	anti-parallel
Strand 3	B	138	143	anti-parallel
Strand 4	B	169	172	anti-parallel

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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	86	first strand
Strand 2	B	56	63	anti-parallel
Strand 3	B	120	129	anti-parallel
Strand 4	B	180	189	anti-parallel
Strand 5	B	149	154	anti-parallel
Strand 6	B	157	162	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	231	first strand
Strand 2	B	237	246	anti-parallel
Strand 3	B	288	296	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	273	first strand
Strand 2	B	255	262	anti-parallel
Strand 3	B	308	316	anti-parallel
Strand 4	B	322	331	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	335	338	first strand
Strand 2	B	341	344	anti-parallel
Strand 3	B	347	348	anti-parallel

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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	453	457	first strand
Strand 2	B	408	412	parallel
Strand 3	B	386	389	parallel
Strand 4	B	353	356	parallel
Strand 5	B	566	567	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	511	512	first strand
Strand 2	B	515	516	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	575	578	first strand
Strand 2	B	584	587	anti-parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	628	632	first strand
Strand 2	B	635	639	anti-parallel
Strand 3	B	677	681	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	661	670	first strand
Strand 2	B	650	658	anti-parallel
Strand 3	B	692	701	anti-parallel
Strand 4	B	714	725	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	739	742	first strand
Strand 2	B	746	751	anti-parallel
Strand 3	B	754	759	anti-parallel
Strand 4	B	767	770	anti-parallel
Strand 5	B	773	774	anti-parallel

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There are 9 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	776	783	first strand
Strand 2	B	881	888	anti-parallel
Strand 3	B	982	990	anti-parallel
Strand 4	B	949	960	anti-parallel
Strand 5	B	1013	1022	anti-parallel
Strand 6	B	864	872	anti-parallel
Strand 7	B	847	858	anti-parallel
Strand 8	B	834	844	anti-parallel
Strand 9	B	819	829	anti-parallel

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There are 7 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	776	783	first strand
Strand 2	B	881	888	anti-parallel
Strand 3	B	982	990	anti-parallel
Strand 4	B	949	960	anti-parallel
Strand 5	B	938	946	anti-parallel
Strand 6	B	894	901	anti-parallel
Strand 7	B	914	921	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	53	first strand
Strand 2	C	212	217	anti-parallel
Strand 3	C	138	143	anti-parallel
Strand 4	C	169	172	anti-parallel

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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	86	first strand
Strand 2	C	56	63	anti-parallel
Strand 3	C	120	129	anti-parallel
Strand 4	C	180	189	anti-parallel
Strand 5	C	149	154	anti-parallel
Strand 6	C	157	162	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	222	231	first strand
Strand 2	C	237	246	anti-parallel
Strand 3	C	288	296	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	273	first strand
Strand 2	C	255	262	anti-parallel
Strand 3	C	308	316	anti-parallel
Strand 4	C	322	331	anti-parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	335	338	first strand
Strand 2	C	341	344	anti-parallel
Strand 3	C	347	348	anti-parallel

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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	453	457	first strand
Strand 2	C	408	412	parallel
Strand 3	C	386	389	parallel
Strand 4	C	353	356	parallel
Strand 5	C	566	567	parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	511	512	first strand
Strand 2	C	515	516	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	575	578	first strand
Strand 2	C	584	587	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	628	632	first strand
Strand 2	C	635	639	anti-parallel
Strand 3	C	677	681	anti-parallel

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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	661	670	first strand
Strand 2	C	650	658	anti-parallel
Strand 3	C	692	701	anti-parallel
Strand 4	C	714	725	anti-parallel

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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	739	742	first strand
Strand 2	C	746	751	anti-parallel
Strand 3	C	754	759	anti-parallel
Strand 4	C	767	770	anti-parallel
Strand 5	C	773	774	anti-parallel

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There are 9 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	776	783	first strand
Strand 2	C	881	888	anti-parallel
Strand 3	C	982	990	anti-parallel
Strand 4	C	949	960	anti-parallel
Strand 5	C	1013	1022	anti-parallel
Strand 6	C	864	872	anti-parallel
Strand 7	C	847	858	anti-parallel
Strand 8	C	834	844	anti-parallel
Strand 9	C	819	829	anti-parallel

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There are 7 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	776	783	first strand
Strand 2	C	881	888	anti-parallel
Strand 3	C	982	990	anti-parallel
Strand 4	C	949	960	anti-parallel
Strand 5	C	938	946	anti-parallel
Strand 6	C	894	901	anti-parallel
Strand 7	C	914	921	anti-parallel

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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	53	first strand
Strand 2	D	212	217	anti-parallel
Strand 3	D	138	143	anti-parallel
Strand 4	D	169	172	anti-parallel

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There are 6 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	86	first strand
Strand 2	D	56	63	anti-parallel
Strand 3	D	120	129	anti-parallel
Strand 4	D	180	189	anti-parallel
Strand 5	D	149	154	anti-parallel
Strand 6	D	157	162	anti-parallel

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There are 3 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	222	231	first strand
Strand 2	D	237	246	anti-parallel
Strand 3	D	288	296	anti-parallel

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There are 4 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	273	first strand
Strand 2	D	255	262	anti-parallel
Strand 3	D	308	316	anti-parallel
Strand 4	D	322	331	anti-parallel

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There are 3 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	335	338	first strand
Strand 2	D	341	344	anti-parallel
Strand 3	D	347	348	anti-parallel

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There are 5 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	453	457	first strand
Strand 2	D	408	412	parallel
Strand 3	D	386	389	parallel
Strand 4	D	353	356	parallel
Strand 5	D	566	567	parallel

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There are 2 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	511	512	first strand
Strand 2	D	515	516	anti-parallel

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There are 2 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	575	578	first strand
Strand 2	D	584	587	anti-parallel

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There are 3 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	628	632	first strand
Strand 2	D	635	639	anti-parallel
Strand 3	D	677	681	anti-parallel

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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	661	670	first strand
Strand 2	D	650	658	anti-parallel
Strand 3	D	692	701	anti-parallel
Strand 4	D	714	725	anti-parallel

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There are 5 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	739	742	first strand
Strand 2	D	746	751	anti-parallel
Strand 3	D	754	759	anti-parallel
Strand 4	D	767	770	anti-parallel
Strand 5	D	773	774	anti-parallel

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There are 9 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	776	783	first strand
Strand 2	D	881	888	anti-parallel
Strand 3	D	982	990	anti-parallel
Strand 4	D	949	960	anti-parallel
Strand 5	D	1013	1022	anti-parallel
Strand 6	D	864	872	anti-parallel
Strand 7	D	847	858	anti-parallel
Strand 8	D	834	844	anti-parallel
Strand 9	D	819	829	anti-parallel

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There are 7 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	776	783	first strand
Strand 2	D	881	888	anti-parallel
Strand 3	D	982	990	anti-parallel
Strand 4	D	949	960	anti-parallel
Strand 5	D	938	946	anti-parallel
Strand 6	D	894	901	anti-parallel
Strand 7	D	914	921	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3J7H

Analysis of interatomic Contacts of Structural Units in PDB entry:
3J7H