Analysis of interatomic Contacts of Structural Units in PDB entry:
3J7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3J7T entry

There is 1 chain in PDB entry 3J7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 994
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 3J7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
12 17Right-handed 310
Helix 3
3
A
25 36Right-handed alpha
Helix 4
4
A
49 54Right-handed alpha
Helix 5
5
A
54 77Right-handed alpha
Helix 6
6
A
85 120Right-handed alpha
Helix 7
7
A
200 204Right-handed 310
Helix 8
8
A
226 229Right-handed 310
Helix 9
9
A
230 241Right-handed alpha
Helix 10
10
A
247 259Right-handed alpha
Helix 11
11
A
259 274Right-handed alpha
Helix 12
12
A
275 279Right-handed 310
Helix 13
13
A
281 285Right-handed 310
Helix 14
14
A
289 307Right-handed alpha
Helix 15
15
A
310 329Right-handed alpha
Helix 16
16
A
336 343Right-handed alpha
Helix 17
17
A
403 406Right-handed 310
Helix 18
18
A
407 420Right-handed alpha
Helix 19
19
A
439 453Right-handed alpha
Helix 20
20
A
463 468Right-handed alpha
Helix 21
21
A
471 476Right-handed alpha
Helix 22
22
A
488 491Right-handed 310
Helix 23
23
A
517 523Right-handed alpha
Helix 24
24
A
538 555Right-handed alpha
Helix 25
25
A
580 582Right-handed 310
Helix 26
26
A
583 588Right-handed alpha
Helix 27
27
A
606 617Right-handed alpha
Helix 28
28
A
628 640Right-handed alpha
Helix 29
29
A
655 661Right-handed alpha
Helix 30
30
A
662 669Right-handed alpha
Helix 31
31
A
670 673Right-handed 310
Helix 32
32
A
682 693Right-handed alpha
Helix 33
33
A
707 714Right-handed alpha
Helix 34
34
A
724 731Right-handed alpha
Helix 35
35
A
739 782Right-handed alpha
Helix 36
36
A
788 799Right-handed alpha
Helix 37
37
A
801 808Right-handed alpha
Helix 38
38
A
830 857Right-handed alpha
Helix 39
39
A
872 876Right-handed 310
Helix 40
40
A
887 892Right-handed 310
Helix 41
41
A
893 915Right-handed alpha
Helix 42
42
A
926 929Right-handed 310
Helix 43
43
A
930 947Right-handed alpha
Helix 44
44
A
951 958Right-handed alpha
Helix 45
45
A
965 975Right-handed alpha
Helix 46
46
A
975 992Right-handed alpha
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There are 8 sheets in PDB entry 3J7T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
150 151anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 168first strand
Strand 2
A
219 225anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 188first strand
Strand 2
A
174 176anti-parallel
Strand 3
A
213 216anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 333first strand
Strand 2
A
733 735anti-parallel
Strand 3
A
718 720parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 351first strand
Strand 2
A
620 624parallel
Strand 3
A
675 677parallel
Strand 4
A
652 654parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 380first strand
Strand 2
A
362 373anti-parallel
Strand 3
A
591 600anti-parallel
Strand 4
A
560 567anti-parallel
Strand 5
A
512 516anti-parallel
Strand 6
A
493 500anti-parallel
Strand 7
A
479 485anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 380first strand
Strand 2
A
362 373anti-parallel
Strand 3
A
591 600anti-parallel
Strand 4
A
525 530parallel
Strand 5
A
533 536anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 427first strand
Strand 2
A
434 437anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il