Analysis of interatomic Contacts of Structural Units in PDB entry:
3J7V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3J7V entry

There are 7 chains in PDB entry 3J7V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 23	LYS 343
B	ASP 23	LYS 343
C	LYS 24	LYS 343
D	ASP 23	LYS 343
E	ASP 23	LYS 343
F	ASP 23	LYS 343
G	ASP 23	LYS 343

There are 48 helices in PDB entry 3J7V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	23	41	Right-handed alpha
Helix 2	2	A	79	85	Right-handed 310
Helix 3	3	A	115	138	Right-handed alpha
Helix 4	4	A	139	148	Right-handed alpha
Helix 5	5	A	178	195	Right-handed alpha
Helix 6	6	A	213	218	Right-handed 310
Helix 7	7	B	24	42	Right-handed alpha
Helix 8	8	B	81	87	Right-handed alpha
Helix 9	9	B	107	113	Right-handed alpha
Helix 10	10	B	116	145	Right-handed alpha
Helix 11	11	B	167	171	Right-handed 310
Helix 12	12	B	181	196	Right-handed alpha
Helix 13	13	B	197	199	Right-handed 310
Helix 14	14	B	213	222	Right-handed alpha
Helix 15	15	C	25	41	Right-handed alpha
Helix 16	16	C	80	87	Right-handed alpha
Helix 17	17	C	107	112	Right-handed 310
Helix 18	18	C	117	145	Right-handed alpha
Helix 19	19	C	180	196	Right-handed alpha
Helix 20	20	C	214	222	Right-handed alpha
Helix 21	21	D	24	42	Right-handed alpha
Helix 22	22	D	80	87	Right-handed alpha
Helix 23	23	D	118	145	Right-handed alpha
Helix 24	24	D	170	174	Right-handed 310
Helix 25	25	D	176	198	Right-handed alpha
Helix 26	26	D	210	212	Right-handed 310
Helix 27	27	D	213	222	Right-handed alpha
Helix 28	28	E	24	42	Right-handed alpha
Helix 29	29	E	82	88	Right-handed alpha
Helix 30	30	E	115	144	Right-handed alpha
Helix 31	31	E	181	198	Right-handed alpha
Helix 32	32	E	213	222	Right-handed alpha
Helix 33	33	F	24	44	Right-handed alpha
Helix 34	34	F	81	86	Right-handed alpha
Helix 35	35	F	119	146	Right-handed alpha
Helix 36	36	F	170	174	Right-handed 310
Helix 37	37	F	176	198	Right-handed alpha
Helix 38	38	F	210	222	Right-handed alpha
Helix 39	39	F	227	231	Right-handed 310
Helix 40	40	F	233	237	Right-handed 310
Helix 41	41	G	24	44	Right-handed alpha
Helix 42	42	G	80	84	Right-handed 310
Helix 43	43	G	115	146	Right-handed alpha
Helix 44	44	G	176	188	Right-handed alpha
Helix 45	45	G	189	191	Right-handed 310
Helix 46	46	G	193	198	Right-handed alpha
Helix 47	47	G	217	222	Right-handed alpha
Helix 48	48	G	272	276	Right-handed 310

There are 28 sheets in PDB entry 3J7V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	53	first strand
Strand 2	A	299	301	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	64	first strand
Strand 2	A	91	95	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	209	first strand
Strand 2	A	247	249	parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	311	first strand
Strand 2	A	320	325	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	63	first strand
Strand 2	B	92	95	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	292	first strand
Strand 2	B	338	340	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	61	first strand
Strand 2	C	94	95	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	D	72	73	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	106	first strand
Strand 2	C	319	322	anti-parallel
Strand 3	C	309	311	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	168	first strand
Strand 2	C	341	343	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	54	first strand
Strand 2	D	299	302	parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	64	first strand
Strand 2	D	91	94	anti-parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	106	first strand
Strand 2	D	319	320	anti-parallel
Strand 3	D	311	312	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	209	first strand
Strand 2	D	247	249	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	61	first strand
Strand 2	E	94	95	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	105	106	first strand
Strand 2	E	317	322	anti-parallel
Strand 3	E	309	313	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	208	209	first strand
Strand 2	E	248	249	parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	289	292	first strand
Strand 2	E	338	340	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	298	299	first strand
Strand 2	E	331	332	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	52	55	first strand
Strand 2	F	300	303	parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	60	63	first strand
Strand 2	F	92	95	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	207	209	first strand
Strand 2	F	247	249	parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	307	312	first strand
Strand 2	F	319	324	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	51	52	first strand
Strand 2	G	299	300	parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	60	61	first strand
Strand 2	G	94	95	anti-parallel

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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	101	first strand
Strand 2	G	319	325	anti-parallel
Strand 3	G	105	106	anti-parallel

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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	101	first strand
Strand 2	G	319	325	anti-parallel
Strand 3	G	308	312	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	207	209	first strand
Strand 2	G	247	249	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3J7V

Analysis of interatomic Contacts of Structural Units in PDB entry:
3J7V