Analysis of interatomic Contacts of Structural Units in PDB entry:
3JBZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JBZ entry

There is 1 chain in PDB entry 3JBZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1385TRP 2549
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3JBZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1385 1407Right-handed alpha
Helix 2
2
A
1409 1423Right-handed alpha
Helix 3
3
A
1425 1440Right-handed alpha
Helix 4
4
A
1445 1453Right-handed alpha
Helix 5
5
A
1455 1469Right-handed alpha
Helix 6
6
A
1473 1487Right-handed alpha
Helix 7
7
A
1489 1499Right-handed alpha
Helix 8
8
A
1505 1523Right-handed alpha
Helix 9
9
A
1525 1534Right-handed alpha
Helix 10
10
A
1540 1554Right-handed alpha
Helix 11
11
A
1556 1573Right-handed alpha
Helix 12
12
A
1573 1578Right-handed alpha
Helix 13
13
A
1587 1604Right-handed alpha
Helix 14
14
A
1611 1625Right-handed alpha
Helix 15
15
A
1629 1641Right-handed alpha
Helix 16
16
A
1645 1650Right-handed alpha
Helix 17
17
A
1650 1664Right-handed alpha
Helix 18
18
A
1665 1678Right-handed alpha
Helix 19
19
A
1693 1707Right-handed alpha
Helix 20
20
A
1709 1730Right-handed alpha
Helix 21
21
A
1737 1763Right-handed alpha
Helix 22
22
A
1768 1784Right-handed alpha
Helix 23
23
A
1786 1812Right-handed alpha
Helix 24
24
A
1868 1893Right-handed alpha
Helix 25
25
A
1899 1913Right-handed alpha
Helix 26
26
A
1916 1930Right-handed alpha
Helix 27
27
A
1932 1937Right-handed 310
Helix 28
28
A
1938 1944Right-handed alpha
Helix 29
29
A
1950 1967Right-handed alpha
Helix 30
30
A
1972 1981Right-handed alpha
Helix 31
31
A
1984 2020Right-handed alpha
Helix 32
32
A
2123 2127Right-handed alpha
Helix 33
33
A
2127 2133Right-handed alpha
Helix 34
34
A
2192 2212Right-handed alpha
Helix 35
35
A
2212 2218Right-handed alpha
Helix 36
36
A
2246 2257Right-handed alpha
Helix 37
37
A
2262 2272Right-handed alpha
Helix 38
38
A
2274 2278Right-handed 310
Helix 39
39
A
2279 2293Right-handed alpha
Helix 40
40
A
2298 2307Right-handed alpha
Helix 41
41
A
2310 2335Right-handed alpha
Helix 42
42
A
2363 2368Right-handed alpha
Helix 43
43
A
2380 2387Right-handed alpha
Helix 44
44
A
2394 2410Right-handed alpha
Helix 45
45
A
2410 2423Right-handed alpha
Helix 46
46
A
2424 2436Right-handed 310
Helix 47
47
A
2493 2509Right-handed alpha
Helix 48
48
A
2520 2534Right-handed alpha
Helix 49
49
A
2534 2539Right-handed alpha
Helix 50
50
A
2542 2546Right-handed 310
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There are 3 sheets in PDB entry 3JBZ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2120 2122first strand
Strand 2
A
2159 2162anti-parallel
Strand 3
A
2170 2171anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2153 2156first strand
Strand 2
A
2173 2176anti-parallel
Strand 3
A
2181 2187anti-parallel
Strand 4
A
2235 2238anti-parallel
Strand 5
A
2227 2229anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2243 2245first strand
Strand 2
A
2344 2347anti-parallel
Strand 3
A
2353 2355anti-parallel
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