Analysis of interatomic Contacts of Structural Units in PDB entry:
3JC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JC7 entry

There are 11 chains in PDB entry 3JC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
2
 PRO 201TYR 864
3
 ASP 18LEU 738
4
 LEU 177THR 838
5
 ASP 21THR 760
6
 LEU 97VAL 969
7
 ALA 4GLN 729
c
 ILE 5LEU 650
D
 VAL 54LEU 293
B
 LEU 3LEU 200
A
 MET 1ILE 208
C
 TYR 3LYS 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are190 helices in PDB entry 3JC7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
2
202 216Right-handed alpha
Helix 2
2
2
225 237Right-handed alpha
Helix 3
3
2
245 253Right-handed alpha
Helix 4
4
2
253 261Right-handed alpha
Helix 5
5
2
263 283Right-handed alpha
Helix 6
6
2
310 314Right-handed 310
Helix 7
7
2
393 397Right-handed 310
Helix 8
8
2
413 415Right-handed 310
Helix 9
9
2
477 486Right-handed alpha
Helix 10
10
2
492 502Right-handed alpha
Helix 11
11
2
508 521Right-handed alpha
Helix 12
12
2
548 560Right-handed alpha
Helix 13
13
2
594 599Right-handed alpha
Helix 14
14
2
609 612Right-handed 310
Helix 15
15
2
613 627Right-handed alpha
Helix 16
16
2
662 667Right-handed alpha
Helix 17
17
2
670 676Right-handed alpha
Helix 18
18
2
688 705Right-handed alpha
Helix 19
19
2
759 774Right-handed alpha
Helix 20
20
2
784 799Right-handed alpha
Helix 21
21
2
806 824Right-handed alpha
Helix 22
22
2
830 849Right-handed alpha
Helix 23
23
2
852 858Right-handed alpha
Helix 24
24
3
19 32Right-handed alpha
Helix 25
25
3
38 55Right-handed alpha
Helix 26
26
3
99 101Right-handed 310
Helix 27
27
3
102 107Right-handed alpha
Helix 28
28
3
107 117Right-handed alpha
Helix 29
29
3
121 135Right-handed alpha
Helix 30
30
3
261 265Right-handed 310
Helix 31
31
3
279 283Right-handed 310
Helix 32
32
3
344 354Right-handed alpha
Helix 33
33
3
358 367Right-handed alpha
Helix 34
34
3
374 387Right-handed alpha
Helix 35
35
3
414 426Right-handed alpha
Helix 36
36
3
461 465Right-handed alpha
Helix 37
37
3
479 491Right-handed alpha
Helix 38
38
3
537 543Right-handed alpha
Helix 39
39
3
554 569Right-handed alpha
Helix 40
40
3
654 666Right-handed alpha
Helix 41
41
3
675 694Right-handed alpha
Helix 42
42
3
698 717Right-handed alpha
Helix 43
43
3
722 738Right-handed alpha
Helix 44
44
4
189 196Right-handed alpha
Helix 45
45
4
226 237Right-handed alpha
Helix 46
46
4
254 264Right-handed alpha
Helix 47
47
4
264 285Right-handed alpha
Helix 48
48
4
294 299Right-handed alpha
Helix 49
49
4
420 424Right-handed 310
Helix 50
50
4
478 483Right-handed alpha
Helix 51
51
4
483 488Right-handed alpha
Helix 52
52
4
502 513Right-handed alpha
Helix 53
53
4
514 516Right-handed 310
Helix 54
54
4
517 527Right-handed alpha
Helix 55
55
4
533 546Right-handed alpha
Helix 56
56
4
573 585Right-handed alpha
Helix 57
57
4
619 624Right-handed alpha
Helix 58
58
4
633 637Right-handed 310
Helix 59
59
4
644 652Right-handed alpha
Helix 60
60
4
687 692Right-handed alpha
Helix 61
61
4
695 702Right-handed alpha
Helix 62
62
4
716 725Right-handed alpha
Helix 63
63
4
745 758Right-handed alpha
Helix 64
64
4
762 779Right-handed alpha
Helix 65
65
4
795 811Right-handed alpha
Helix 66
66
4
812 814Right-handed 310
Helix 67
67
4
821 835Right-handed alpha
Helix 68
68
5
22 37Right-handed alpha
Helix 69
69
5
44 56Right-handed alpha
Helix 70
70
5
64 72Right-handed alpha
Helix 71
71
5
72 80Right-handed alpha
Helix 72
72
5
82 102Right-handed alpha
Helix 73
73
5
147 151Right-handed 310
Helix 74
74
5
279 283Right-handed 310
Helix 75
75
5
350 361Right-handed alpha
Helix 76
76
5
365 371Right-handed alpha
Helix 77
77
5
381 393Right-handed alpha
Helix 78
78
5
421 433Right-handed alpha
Helix 79
79
5
467 472Right-handed alpha
Helix 80
80
5
487 500Right-handed alpha
Helix 81
81
5
529 534Right-handed alpha
Helix 82
82
5
544 550Right-handed alpha
Helix 83
83
5
564 574Right-handed alpha
Helix 84
84
5
579 592Right-handed alpha
Helix 85
85
5
596 610Right-handed alpha
Helix 86
86
5
615 637Right-handed alpha
Helix 87
87
5
638 640Right-handed 310
Helix 88
88
5
649 667Right-handed alpha
Helix 89
89
5
673 693Right-handed alpha
Helix 90
90
5
707 712Right-handed alpha
Helix 91
91
5
714 719Right-handed alpha
Helix 92
92
5
728 737Right-handed alpha
Helix 93
93
5
744 759Right-handed alpha
Helix 94
94
6
106 121Right-handed alpha
Helix 95
95
6
135 144Right-handed alpha
Helix 96
96
6
155 161Right-handed alpha
Helix 97
97
6
164 170Right-handed alpha
Helix 98
98
6
173 176Right-handed 310
Helix 99
99
6
177 193Right-handed alpha
Helix 100
100
6
511 522Right-handed alpha
Helix 101
101
6
524 533Right-handed alpha
Helix 102
102
6
541 552Right-handed alpha
Helix 103
103
6
580 592Right-handed alpha
Helix 104
104
6
641 644Right-handed 310
Helix 105
105
6
646 658Right-handed alpha
Helix 106
106
6
694 699Right-handed alpha
Helix 107
107
6
702 707Right-handed alpha
Helix 108
108
6
720 736Right-handed alpha
Helix 109
109
6
749 759Right-handed alpha
Helix 110
110
6
769 783Right-handed alpha
Helix 111
111
6
796 815Right-handed alpha
Helix 112
112
6
820 837Right-handed alpha
Helix 113
113
6
906 927Right-handed alpha
Helix 114
114
6
932 945Right-handed alpha
Helix 115
115
6
950 969Right-handed alpha
Helix 116
116
7
13 25Right-handed alpha
Helix 117
117
7
61 72Right-handed alpha
Helix 118
118
7
82 92Right-handed alpha
Helix 119
119
7
102 110Right-handed alpha
Helix 120
120
7
111 115Right-handed 310
Helix 121
121
7
119 125Right-handed alpha
Helix 122
122
7
139 158Right-handed alpha
Helix 123
123
7
216 220Right-handed 310
Helix 124
124
7
338 340Right-handed 310
Helix 125
125
7
397 407Right-handed alpha
Helix 126
126
7
409 418Right-handed alpha
Helix 127
127
7
425 438Right-handed alpha
Helix 128
128
7
467 477Right-handed alpha
Helix 129
129
7
489 494Right-handed alpha
Helix 130
130
7
531 540Right-handed alpha
Helix 131
131
7
541 543Right-handed 310
Helix 132
132
7
587 592Right-handed alpha
Helix 133
133
7
605 622Right-handed alpha
Helix 134
134
7
634 646Right-handed alpha
Helix 135
135
7
653 674Right-handed alpha
Helix 136
136
7
685 704Right-handed alpha
Helix 137
137
7
709 724Right-handed alpha
Helix 138
138
7
725 729Right-handed 310
Helix 139
139
c
7 18Right-handed alpha
Helix 140
140
c
35 52Right-handed alpha
Helix 141
141
c
63 74Right-handed alpha
Helix 142
142
c
91 97Right-handed alpha
Helix 143
143
c
130 135Right-handed alpha
Helix 144
144
c
152 157Right-handed alpha
Helix 145
145
c
219 240Right-handed alpha
Helix 146
146
c
250 263Right-handed alpha
Helix 147
147
c
266 278Right-handed alpha
Helix 148
148
c
287 289Right-handed 310
Helix 149
149
c
290 301Right-handed alpha
Helix 150
150
c
333 340Right-handed alpha
Helix 151
151
c
341 348Right-handed alpha
Helix 152
152
c
352 367Right-handed alpha
Helix 153
153
c
369 375Right-handed alpha
Helix 154
154
c
376 380Right-handed 310
Helix 155
155
c
381 387Right-handed alpha
Helix 156
156
c
390 396Right-handed alpha
Helix 157
157
c
397 400Right-handed 310
Helix 158
158
c
421 434Right-handed alpha
Helix 159
159
c
463 483Right-handed alpha
Helix 160
160
c
491 515Right-handed alpha
Helix 161
161
c
537 540Right-handed 310
Helix 162
162
c
541 557Right-handed alpha
Helix 163
163
c
604 614Right-handed alpha
Helix 164
164
c
633 646Right-handed alpha
Helix 165
165
D
55 73Right-handed alpha
Helix 166
166
D
80 105Right-handed alpha
Helix 167
167
D
123 164Right-handed alpha
Helix 168
168
D
178 198Right-handed alpha
Helix 169
169
D
279 288Right-handed alpha
Helix 170
170
B
12 21Right-handed alpha
Helix 171
171
B
73 82Right-handed alpha
Helix 172
172
B
94 107Right-handed alpha
Helix 173
173
B
118 129Right-handed alpha
Helix 174
174
B
130 133Right-handed 310
Helix 175
175
B
140 160Right-handed alpha
Helix 176
176
B
161 163Right-handed 310
Helix 177
177
B
174 199Right-handed alpha
Helix 178
178
A
3 22Right-handed alpha
Helix 179
179
A
34 61Right-handed alpha
Helix 180
180
A
67 104Right-handed alpha
Helix 181
181
A
124 145Right-handed alpha
Helix 182
182
A
193 201Right-handed alpha
Helix 183
183
C
5 12Right-handed alpha
Helix 184
184
C
48 55Right-handed alpha
Helix 185
185
C
77 80Right-handed 310
Helix 186
186
C
81 88Right-handed alpha
Helix 187
187
C
104 116Right-handed alpha
Helix 188
188
C
118 136Right-handed alpha
Helix 189
189
C
164 169Right-handed 310
Helix 190
190
C
170 192Right-handed alpha
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There are 40 sheets in PDB entry 3JC7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
331 333first strand
Strand 2
2
383 391anti-parallel
Strand 3
2
405 411anti-parallel
Strand 4
2
450 452parallel
Strand 5
2
429 431anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
331 333first strand
Strand 2
2
383 391anti-parallel
Strand 3
2
320 325anti-parallel
Strand 4
2
423 426anti-parallel
Strand 5
2
456 458anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
563 565first strand
Strand 2
2
603 607parallel
Strand 3
2
645 650parallel
Strand 4
2
539 542parallel
Strand 5
2
679 682parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
629 631first strand
Strand 2
2
638 640anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
179 180first strand
Strand 2
3
296 300anti-parallel
Strand 3
3
319 321anti-parallel
Strand 4
3
274 277parallel
Strand 5
3
255 259anti-parallel
Strand 6
3
184 186anti-parallel
Strand 7
3
291 293anti-parallel
Strand 8
3
327 328anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
210 213first strand
Strand 2
3
198 203anti-parallel
Strand 3
3
241 243anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
391 392first strand
Strand 2
3
398 399anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
431 433first strand
Strand 2
3
469 473parallel
Strand 3
3
511 515parallel
Strand 4
3
405 409parallel
Strand 5
3
545 549parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
494 497first strand
Strand 2
3
504 507anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
332 335first strand
Strand 2
4
397 400anti-parallel
Strand 3
4
414 417anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
339 342first strand
Strand 2
4
391 394anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
344 345first strand
Strand 2
4
358 359anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
365 366first strand
Strand 2
6
419 420parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
434 436first strand
Strand 2
4
465 467anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
439 442first strand
Strand 2
4
458 461anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
590 591first strand
Strand 2
4
628 631parallel
Strand 3
4
670 675parallel
Strand 4
4
564 567parallel
Strand 5
4
704 707parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
606 607first strand
Strand 2
4
614 615anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
653 656first strand
Strand 2
4
663 666anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
60 63first strand
Strand 2
5
136 139parallel
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There are 7 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
298 301first strand
Strand 2
5
325 329anti-parallel
Strand 3
5
273 277parallel
Strand 4
5
256 260anti-parallel
Strand 5
5
162 169anti-parallel
Strand 6
5
291 294anti-parallel
Strand 7
5
334 335anti-parallel
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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
190 193first strand
Strand 2
5
176 183anti-parallel
Strand 3
5
241 250anti-parallel
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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
436 440first strand
Strand 2
5
476 480parallel
Strand 3
5
518 522parallel
Strand 4
5
412 413parallel
Strand 5
5
552 553parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
501 503first strand
Strand 2
5
512 514anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
150 154first strand
Strand 2
6
264 268parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
273 274first strand
Strand 2
6
289 290parallel
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There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
454 456first strand
Strand 2
6
377 381parallel
Strand 3
6
357 362anti-parallel
Strand 4
6
292 295anti-parallel
Strand 5
6
394 397anti-parallel
Strand 6
6
459 460anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
404 405first strand
Strand 2
6
450 451anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
570 574first strand
Strand 2
6
677 682parallel
Strand 3
6
635 639parallel
Strand 4
6
597 598parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
660 664first strand
Strand 2
6
669 673anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
77 81first strand
Strand 2
7
201 205parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
252 253first strand
Strand 2
7
309 316anti-parallel
Strand 3
7
331 336anti-parallel
Strand 4
7
376 377parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
252 253first strand
Strand 2
7
309 316anti-parallel
Strand 3
7
239 246anti-parallel
Strand 4
7
348 353anti-parallel
Strand 5
7
380 383anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
269 270first strand
Strand 2
7
259 262anti-parallel
Strand 3
7
298 300anti-parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
481 484first strand
Strand 2
7
520 524parallel
Strand 3
7
562 566parallel
Strand 4
7
455 459parallel
Strand 5
7
596 599parallel
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There are 6 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
119 123first strand
Strand 2
c
80 84parallel
Strand 3
c
28 31parallel
Strand 4
c
56 60parallel
Strand 5
A
188 192anti-parallel
Strand 6
A
162 166anti-parallel
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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
318 321first strand
Strand 2
c
408 414anti-parallel
Strand 3
c
417 420anti-parallel
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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
569 571first strand
Strand 2
c
580 582anti-parallel
Strand 3
c
629 630anti-parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
227 228first strand
Strand 2
D
277 278anti-parallel
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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 72first strand
Strand 2
B
24 29anti-parallel
Strand 3
B
85 87anti-parallel
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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 19first strand
Strand 2
C
43 47anti-parallel
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