Analysis of interatomic Contacts of Structural Units in PDB entry:
3JQ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JQ3 entry

There is 1 chain in PDB entry 3JQ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3ALA 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3JQ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 11Right-handed alpha
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
26 34Right-handed alpha
Helix 4
4
A
43 54Right-handed alpha
Helix 5
5
A
67 72Right-handed alpha
Helix 6
6
A
72 84Right-handed alpha
Helix 7
7
A
99 103Right-handed 310
Helix 8
8
A
134 150Right-handed alpha
Helix 9
9
A
151 152Right-handed 310
Helix 10
10
A
153 156Right-handed 310
Helix 11
11
A
164 166Right-handed 310
Helix 12
12
A
167 177Right-handed alpha
Helix 13
13
A
186 192Right-handed alpha
Helix 14
14
A
232 253Right-handed alpha
Helix 15
15
A
270 274Right-handed 310
Helix 16
16
A
288 292Right-handed 310
Helix 17
17
A
294 302Right-handed alpha
Helix 18
18
A
316 318Right-handed 310
Helix 19
19
A
332 356Right-handed alpha
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There are 2 sheets in PDB entry 3JQ3. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
203 207anti-parallel
Strand 3
A
212 216anti-parallel
Strand 4
A
222 229anti-parallel
Strand 5
A
113 122anti-parallel
Strand 6
A
279 285anti-parallel
Strand 7
A
320 325anti-parallel
Strand 8
A
304 307anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 261first strand
Strand 2
A
265 266anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il