Analysis of interatomic Contacts of Structural Units in PDB entry:
3JR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JR6 entry

There are 4 chains in PDB entry 3JR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 170
B
 MET 1ASN 169
C
 MET 1LEU 170
D
 MET 1ASN 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 3JR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 11Right-handed alpha
Helix 2
2
A
45 57Right-handed alpha
Helix 3
3
A
65 85Right-handed alpha
Helix 4
4
A
89 97Right-handed alpha
Helix 5
5
A
98 120Right-handed alpha
Helix 6
6
A
120 130Right-handed alpha
Helix 7
7
A
131 140Right-handed alpha
Helix 8
8
A
142 148Right-handed alpha
Helix 9
9
A
148 162Right-handed alpha
Helix 10
10
A
164 168Right-handed 310
Helix 11
11
B
2 11Right-handed alpha
Helix 12
12
B
47 57Right-handed alpha
Helix 13
13
B
65 85Right-handed alpha
Helix 14
14
B
90 97Right-handed alpha
Helix 15
15
B
98 119Right-handed alpha
Helix 16
16
B
120 130Right-handed alpha
Helix 17
17
B
131 140Right-handed alpha
Helix 18
18
B
142 148Right-handed alpha
Helix 19
19
B
148 162Right-handed alpha
Helix 20
20
B
163 168Right-handed 310
Helix 21
21
C
2 11Right-handed alpha
Helix 22
22
C
48 57Right-handed alpha
Helix 23
23
C
65 85Right-handed alpha
Helix 24
24
C
90 97Right-handed alpha
Helix 25
25
C
98 113Right-handed alpha
Helix 26
26
C
113 119Right-handed alpha
Helix 27
27
C
120 129Right-handed alpha
Helix 28
28
C
131 141Right-handed alpha
Helix 29
29
C
142 148Right-handed alpha
Helix 30
30
C
148 162Right-handed alpha
Helix 31
31
D
2 11Right-handed alpha
Helix 32
32
D
44 57Right-handed alpha
Helix 33
33
D
65 85Right-handed alpha
Helix 34
34
D
89 97Right-handed alpha
Helix 35
35
D
98 113Right-handed alpha
Helix 36
36
D
113 120Right-handed alpha
Helix 37
37
D
120 130Right-handed alpha
Helix 38
38
D
131 140Right-handed alpha
Helix 39
39
D
142 148Right-handed alpha
Helix 40
40
D
148 162Right-handed alpha
Helix 41
41
D
163 168Right-handed 310
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There are 5 sheets in PDB entry 3JR6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 20first strand
Strand 2
A
24 28anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
25 26anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 19first strand
Strand 2
C
25 26anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 19first strand
Strand 2
D
25 28anti-parallel
Strand 3
D
31 33anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 36first strand
Strand 2
D
39 40anti-parallel
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