Analysis of interatomic Contacts of Structural Units in PDB entry:
3JSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JSX entry

There are 8 chains in PDB entry 3JSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ALA 271
B
 GLY 2ALA 271
C
 GLY 2ALA 271
D
 GLY 2ALA 271
E
 GLY 2ALA 271
F
 GLY 2ALA 271
G
 GLY 2ALA 271
H
 GLY 2ALA 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 3JSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 32Right-handed alpha
Helix 2
2
A
42 45Right-handed 310
Helix 3
3
A
51 55Right-handed 310
Helix 4
4
A
61 65Right-handed 310
Helix 5
5
A
66 78Right-handed alpha
Helix 6
6
A
81 94Right-handed alpha
Helix 7
7
A
109 120Right-handed alpha
Helix 8
8
A
131 135Right-handed 310
Helix 9
9
A
163 173Right-handed alpha
Helix 10
10
A
176 180Right-handed 310
Helix 11
11
A
191 195Right-handed 310
Helix 12
12
A
198 213Right-handed alpha
Helix 13
13
A
214 217Right-handed 310
Helix 14
14
A
224 228Right-handed 310
Helix 15
15
A
239 246Right-handed alpha
Helix 16
16
B
16 31Right-handed alpha
Helix 17
17
B
51 55Right-handed 310
Helix 18
18
B
66 78Right-handed alpha
Helix 19
19
B
81 94Right-handed alpha
Helix 20
20
B
109 120Right-handed alpha
Helix 21
21
B
127 139Right-handed 310
Helix 22
22
B
151 156Right-handed 310
Helix 23
23
B
163 173Right-handed alpha
Helix 24
24
B
176 180Right-handed 310
Helix 25
25
B
191 195Right-handed 310
Helix 26
26
B
196 212Right-handed alpha
Helix 27
27
B
213 217Right-handed 310
Helix 28
28
B
224 228Right-handed 310
Helix 29
29
B
239 245Right-handed alpha
Helix 30
30
C
16 32Right-handed alpha
Helix 31
31
C
41 45Right-handed alpha
Helix 32
32
C
51 55Right-handed 310
Helix 33
33
C
66 78Right-handed alpha
Helix 34
34
C
81 94Right-handed alpha
Helix 35
35
C
109 120Right-handed alpha
Helix 36
36
C
127 135Right-handed 310
Helix 37
37
C
163 173Right-handed alpha
Helix 38
38
C
191 195Right-handed 310
Helix 39
39
C
196 212Right-handed alpha
Helix 40
40
C
213 217Right-handed 310
Helix 41
41
C
224 228Right-handed 310
Helix 42
42
C
239 247Right-handed alpha
Helix 43
43
D
16 32Right-handed alpha
Helix 44
44
D
41 45Right-handed alpha
Helix 45
45
D
51 55Right-handed 310
Helix 46
46
D
61 65Right-handed 310
Helix 47
47
D
66 78Right-handed alpha
Helix 48
48
D
81 94Right-handed alpha
Helix 49
49
D
109 120Right-handed alpha
Helix 50
50
D
127 135Right-handed 310
Helix 51
51
D
163 173Right-handed alpha
Helix 52
52
D
176 180Right-handed 310
Helix 53
53
D
191 195Right-handed 310
Helix 54
54
D
196 211Right-handed alpha
Helix 55
55
D
212 217Right-handed 310
Helix 56
56
D
224 228Right-handed 310
Helix 57
57
D
239 247Right-handed alpha
Helix 58
58
E
16 32Right-handed alpha
Helix 59
59
E
51 55Right-handed 310
Helix 60
60
E
66 78Right-handed alpha
Helix 61
61
E
81 94Right-handed alpha
Helix 62
62
E
109 120Right-handed alpha
Helix 63
63
E
131 135Right-handed 310
Helix 64
64
E
163 173Right-handed alpha
Helix 65
65
E
176 180Right-handed 310
Helix 66
66
E
196 212Right-handed alpha
Helix 67
67
E
213 217Right-handed 310
Helix 68
68
E
224 228Right-handed 310
Helix 69
69
E
239 247Right-handed alpha
Helix 70
70
F
16 32Right-handed alpha
Helix 71
71
F
51 55Right-handed 310
Helix 72
72
F
61 65Right-handed 310
Helix 73
73
F
66 78Right-handed alpha
Helix 74
74
F
81 94Right-handed alpha
Helix 75
75
F
109 120Right-handed alpha
Helix 76
76
F
131 135Right-handed 310
Helix 77
77
F
163 173Right-handed alpha
Helix 78
78
F
176 180Right-handed 310
Helix 79
79
F
191 195Right-handed 310
Helix 80
80
F
196 212Right-handed alpha
Helix 81
81
F
213 217Right-handed 310
Helix 82
82
F
224 228Right-handed 310
Helix 83
83
F
231 235Right-handed 310
Helix 84
84
F
239 246Right-handed alpha
Helix 85
85
G
16 33Right-handed alpha
Helix 86
86
G
51 55Right-handed 310
Helix 87
87
G
61 65Right-handed 310
Helix 88
88
G
66 77Right-handed alpha
Helix 89
89
G
81 94Right-handed alpha
Helix 90
90
G
109 120Right-handed alpha
Helix 91
91
G
131 135Right-handed 310
Helix 92
92
G
163 173Right-handed alpha
Helix 93
93
G
176 180Right-handed 310
Helix 94
94
G
191 195Right-handed 310
Helix 95
95
G
196 211Right-handed alpha
Helix 96
96
G
212 217Right-handed 310
Helix 97
97
G
224 228Right-handed 310
Helix 98
98
G
239 246Right-handed alpha
Helix 99
99
H
16 32Right-handed alpha
Helix 100
100
H
51 55Right-handed 310
Helix 101
101
H
61 65Right-handed 310
Helix 102
102
H
66 77Right-handed alpha
Helix 103
103
H
81 94Right-handed alpha
Helix 104
104
H
109 120Right-handed alpha
Helix 105
105
H
127 135Right-handed 310
Helix 106
106
H
163 173Right-handed alpha
Helix 107
107
H
176 180Right-handed 310
Helix 108
108
H
191 195Right-handed 310
Helix 109
109
H
198 212Right-handed alpha
Helix 110
110
H
213 217Right-handed 310
Helix 111
111
H
224 228Right-handed 310
Helix 112
112
H
239 248Right-handed alpha
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There are 16 sheets in PDB entry 3JSX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
4 9parallel
Strand 3
A
96 102parallel
Strand 4
A
141 147parallel
Strand 5
A
182 183parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
4 9parallel
Strand 3
A
96 102parallel
Strand 4
A
141 147parallel
Strand 5
A
187 189parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 40first strand
Strand 2
B
4 9parallel
Strand 3
B
96 102parallel
Strand 4
B
141 147parallel
Strand 5
B
182 183parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 40first strand
Strand 2
B
4 9parallel
Strand 3
B
96 102parallel
Strand 4
B
141 147parallel
Strand 5
B
187 189parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 40first strand
Strand 2
C
4 9parallel
Strand 3
C
96 102parallel
Strand 4
C
141 147parallel
Strand 5
C
182 183parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 40first strand
Strand 2
C
4 9parallel
Strand 3
C
96 102parallel
Strand 4
C
141 147parallel
Strand 5
C
187 189parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 40first strand
Strand 2
D
4 9parallel
Strand 3
D
96 102parallel
Strand 4
D
141 147parallel
Strand 5
D
182 183parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 40first strand
Strand 2
D
4 9parallel
Strand 3
D
96 102parallel
Strand 4
D
141 147parallel
Strand 5
D
187 189parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
35 40first strand
Strand 2
E
4 9parallel
Strand 3
E
96 102parallel
Strand 4
E
141 147parallel
Strand 5
E
182 183parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
35 40first strand
Strand 2
E
4 9parallel
Strand 3
E
96 102parallel
Strand 4
E
141 147parallel
Strand 5
E
187 189parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
35 40first strand
Strand 2
F
4 9parallel
Strand 3
F
96 102parallel
Strand 4
F
141 147parallel
Strand 5
F
182 183parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
35 40first strand
Strand 2
F
4 9parallel
Strand 3
F
96 102parallel
Strand 4
F
141 147parallel
Strand 5
F
187 189parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
35 40first strand
Strand 2
G
4 9parallel
Strand 3
G
96 102parallel
Strand 4
G
141 147parallel
Strand 5
G
182 183parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
35 40first strand
Strand 2
G
4 9parallel
Strand 3
G
96 102parallel
Strand 4
G
141 147parallel
Strand 5
G
187 189parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
35 40first strand
Strand 2
H
4 9parallel
Strand 3
H
96 102parallel
Strand 4
H
141 147parallel
Strand 5
H
182 183parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
35 40first strand
Strand 2
H
4 9parallel
Strand 3
H
96 102parallel
Strand 4
H
141 147parallel
Strand 5
H
187 189parallel
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