Analysis of interatomic Contacts of Structural Units in PDB entry:
3JW7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JW7 entry

There are 8 chains in PDB entry 3JW7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 353
B
 MET 1SER 353
C
 MET 1SER 353
D
 MET 1SER 353
E
 MET 1SER 353
F
 MET 1SER 353
G
 MET 1SER 353
H
 MET 1SER 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 3JW7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
58 73Right-handed alpha
Helix 2
2
A
80 92Right-handed alpha
Helix 3
3
A
95 115Right-handed alpha
Helix 4
4
A
117 122Right-handed alpha
Helix 5
5
A
139 153Right-handed alpha
Helix 6
6
A
165 181Right-handed alpha
Helix 7
7
A
195 206Right-handed alpha
Helix 8
8
A
207 209Right-handed 310
Helix 9
9
A
222 233Right-handed alpha
Helix 10
10
A
245 256Right-handed alpha
Helix 11
11
A
264 269Right-handed alpha
Helix 12
12
A
270 285Right-handed alpha
Helix 13
13
A
297 311Right-handed alpha
Helix 14
14
A
320 325Right-handed 310
Helix 15
15
B
51 56Right-handed alpha
Helix 16
16
B
58 74Right-handed alpha
Helix 17
17
B
80 92Right-handed alpha
Helix 18
18
B
95 115Right-handed alpha
Helix 19
19
B
117 122Right-handed alpha
Helix 20
20
B
139 153Right-handed alpha
Helix 21
21
B
165 181Right-handed alpha
Helix 22
22
B
195 206Right-handed alpha
Helix 23
23
B
207 209Right-handed 310
Helix 24
24
B
222 233Right-handed alpha
Helix 25
25
B
245 256Right-handed alpha
Helix 26
26
B
264 269Right-handed alpha
Helix 27
27
B
270 285Right-handed alpha
Helix 28
28
B
297 311Right-handed alpha
Helix 29
29
B
320 325Right-handed 310
Helix 30
30
C
58 74Right-handed alpha
Helix 31
31
C
80 92Right-handed alpha
Helix 32
32
C
95 115Right-handed alpha
Helix 33
33
C
117 121Right-handed 310
Helix 34
34
C
139 153Right-handed alpha
Helix 35
35
C
165 181Right-handed alpha
Helix 36
36
C
195 206Right-handed alpha
Helix 37
37
C
207 209Right-handed 310
Helix 38
38
C
222 231Right-handed alpha
Helix 39
39
C
245 256Right-handed alpha
Helix 40
40
C
264 269Right-handed alpha
Helix 41
41
C
270 285Right-handed alpha
Helix 42
42
C
297 311Right-handed alpha
Helix 43
43
C
320 325Right-handed 310
Helix 44
44
D
58 74Right-handed alpha
Helix 45
45
D
80 92Right-handed alpha
Helix 46
46
D
95 114Right-handed alpha
Helix 47
47
D
117 122Right-handed alpha
Helix 48
48
D
139 152Right-handed alpha
Helix 49
49
D
165 181Right-handed alpha
Helix 50
50
D
195 206Right-handed alpha
Helix 51
51
D
207 209Right-handed 310
Helix 52
52
D
222 231Right-handed alpha
Helix 53
53
D
245 256Right-handed alpha
Helix 54
54
D
264 269Right-handed alpha
Helix 55
55
D
270 285Right-handed alpha
Helix 56
56
D
297 311Right-handed alpha
Helix 57
57
D
320 325Right-handed 310
Helix 58
58
E
51 56Right-handed alpha
Helix 59
59
E
58 73Right-handed alpha
Helix 60
60
E
80 92Right-handed alpha
Helix 61
61
E
95 115Right-handed alpha
Helix 62
62
E
117 122Right-handed alpha
Helix 63
63
E
139 152Right-handed alpha
Helix 64
64
E
165 181Right-handed alpha
Helix 65
65
E
195 206Right-handed alpha
Helix 66
66
E
207 209Right-handed 310
Helix 67
67
E
222 233Right-handed alpha
Helix 68
68
E
245 256Right-handed alpha
Helix 69
69
E
264 269Right-handed alpha
Helix 70
70
E
270 285Right-handed alpha
Helix 71
71
E
297 311Right-handed alpha
Helix 72
72
E
320 325Right-handed 310
Helix 73
73
F
58 73Right-handed alpha
Helix 74
74
F
80 92Right-handed alpha
Helix 75
75
F
95 115Right-handed alpha
Helix 76
76
F
117 122Right-handed alpha
Helix 77
77
F
139 153Right-handed alpha
Helix 78
78
F
165 181Right-handed alpha
Helix 79
79
F
195 206Right-handed alpha
Helix 80
80
F
207 209Right-handed 310
Helix 81
81
F
222 233Right-handed alpha
Helix 82
82
F
245 256Right-handed alpha
Helix 83
83
F
264 269Right-handed alpha
Helix 84
84
F
270 284Right-handed alpha
Helix 85
85
F
297 311Right-handed alpha
Helix 86
86
F
320 325Right-handed 310
Helix 87
87
G
51 56Right-handed alpha
Helix 88
88
G
58 73Right-handed alpha
Helix 89
89
G
80 92Right-handed alpha
Helix 90
90
G
95 115Right-handed alpha
Helix 91
91
G
117 122Right-handed alpha
Helix 92
92
G
139 153Right-handed alpha
Helix 93
93
G
165 181Right-handed alpha
Helix 94
94
G
195 206Right-handed alpha
Helix 95
95
G
207 209Right-handed 310
Helix 96
96
G
222 233Right-handed alpha
Helix 97
97
G
245 256Right-handed alpha
Helix 98
98
G
264 269Right-handed alpha
Helix 99
99
G
270 285Right-handed alpha
Helix 100
100
G
297 311Right-handed alpha
Helix 101
101
G
320 325Right-handed 310
Helix 102
102
H
51 56Right-handed alpha
Helix 103
103
H
58 73Right-handed alpha
Helix 104
104
H
80 92Right-handed alpha
Helix 105
105
H
95 115Right-handed alpha
Helix 106
106
H
117 122Right-handed alpha
Helix 107
107
H
139 152Right-handed alpha
Helix 108
108
H
165 181Right-handed alpha
Helix 109
109
H
195 206Right-handed alpha
Helix 110
110
H
207 209Right-handed 310
Helix 111
111
H
222 233Right-handed alpha
Helix 112
112
H
245 256Right-handed alpha
Helix 113
113
H
264 269Right-handed alpha
Helix 114
114
H
270 285Right-handed alpha
Helix 115
115
H
297 311Right-handed alpha
Helix 116
116
H
320 325Right-handed 310
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There are 31 sheets in PDB entry 3JW7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 21first strand
Strand 2
A
24 38anti-parallel
Strand 3
A
43 48anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
341 343anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
157 161parallel
Strand 3
A
185 189parallel
Strand 4
A
211 215parallel
Strand 5
A
236 239parallel
Strand 6
A
260 263parallel
Strand 7
A
287 290parallel
Strand 8
A
314 317parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 332first strand
Strand 2
A
352 353anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 21first strand
Strand 2
B
24 38anti-parallel
Strand 3
B
43 48anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 130first strand
Strand 2
B
341 343anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 135first strand
Strand 2
B
157 161parallel
Strand 3
B
185 189parallel
Strand 4
B
211 215parallel
Strand 5
B
236 239parallel
Strand 6
B
260 263parallel
Strand 7
B
287 290parallel
Strand 8
B
314 317parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 332first strand
Strand 2
B
352 353anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 21first strand
Strand 2
C
24 38anti-parallel
Strand 3
C
43 48anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
128 130first strand
Strand 2
C
341 343anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
133 135first strand
Strand 2
C
157 161parallel
Strand 3
C
185 189parallel
Strand 4
C
211 215parallel
Strand 5
C
236 239parallel
Strand 6
C
260 263parallel
Strand 7
C
287 290parallel
Strand 8
C
314 317parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
331 332first strand
Strand 2
C
352 353anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 21first strand
Strand 2
D
24 38anti-parallel
Strand 3
D
43 48anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 130first strand
Strand 2
D
341 343anti-parallel
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There are 8 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
133 135first strand
Strand 2
D
157 161parallel
Strand 3
D
185 189parallel
Strand 4
D
211 215parallel
Strand 5
D
236 239parallel
Strand 6
D
260 263parallel
Strand 7
D
287 290parallel
Strand 8
D
314 317parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 21first strand
Strand 2
E
24 38anti-parallel
Strand 3
E
43 48anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
128 130first strand
Strand 2
E
341 343anti-parallel
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There are 8 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
133 135first strand
Strand 2
E
157 161parallel
Strand 3
E
185 189parallel
Strand 4
E
211 215parallel
Strand 5
E
236 239parallel
Strand 6
E
260 263parallel
Strand 7
E
287 290parallel
Strand 8
E
314 317parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
331 332first strand
Strand 2
E
352 353anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 21first strand
Strand 2
F
24 38anti-parallel
Strand 3
F
43 48anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
128 130first strand
Strand 2
F
341 343anti-parallel
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There are 8 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
133 135first strand
Strand 2
F
157 161parallel
Strand 3
F
185 189parallel
Strand 4
F
211 215parallel
Strand 5
F
236 239parallel
Strand 6
F
260 263parallel
Strand 7
F
287 290parallel
Strand 8
F
314 317parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
331 332first strand
Strand 2
F
352 353anti-parallel
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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
3 21first strand
Strand 2
G
24 38anti-parallel
Strand 3
G
43 48anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
128 130first strand
Strand 2
G
341 343anti-parallel
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There are 8 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
133 135first strand
Strand 2
G
157 161parallel
Strand 3
G
185 189parallel
Strand 4
G
211 215parallel
Strand 5
G
236 239parallel
Strand 6
G
260 263parallel
Strand 7
G
287 290parallel
Strand 8
G
314 317parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
331 332first strand
Strand 2
G
352 353anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 21first strand
Strand 2
H
24 38anti-parallel
Strand 3
H
43 48anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
128 130first strand
Strand 2
H
341 343anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
133 135first strand
Strand 2
H
157 161parallel
Strand 3
H
185 189parallel
Strand 4
H
211 215parallel
Strand 5
H
236 239parallel
Strand 6
H
260 263parallel
Strand 7
H
287 290parallel
Strand 8
H
314 317parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
331 332first strand
Strand 2
H
352 353anti-parallel
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