Analysis of interatomic Contacts of Structural Units in PDB entry:
3JWN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JWN entry

There are 10 chains in PDB entry 3JWN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 1GLU 205
E
 ALA 1GLN 154
F
 ALA 1GLN 154
G
 ALA 1SER 144
H
 PHE 1GLN 279
I
 GLY 1GLU 205
K
 ALA 1GLN 154
L
 ALA 1GLN 154
M
 ALA 1SER 144
N
 PHE 1GLN 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3JWN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
123 131Right-handed 310
Helix 2
2
E
29 34Right-handed alpha
Helix 3
3
F
20 24Right-handed 310
Helix 4
4
H
66 69Right-handed 310
Helix 5
5
I
123 130Right-handed 310
Helix 6
6
K
108 112Right-handed 310
Helix 7
7
L
20 22Right-handed 310
Helix 8
8
L
33 37Right-handed 310
Helix 9
9
L
108 112Right-handed 310
Helix 10
10
M
33 35Right-handed 310
Helix 11
11
N
66 69Right-handed 310
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There are 41 sheets in PDB entry 3JWN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 4first strand
Strand 2
C
18 24anti-parallel
Strand 3
C
61 69anti-parallel
Strand 4
C
48 51anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 12first strand
Strand 2
C
102 116parallel
Strand 3
E
23 24anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 58first strand
Strand 2
C
30 39anti-parallel
Strand 3
C
81 91anti-parallel
Strand 4
C
102 116anti-parallel
Strand 5
E
145 153parallel
Strand 6
E
62 68anti-parallel
Strand 7
E
114 116anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 136first strand
Strand 2
C
139 144anti-parallel
Strand 3
C
171 176anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 161first strand
Strand 2
C
150 157anti-parallel
Strand 3
C
165 167anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 161first strand
Strand 2
C
150 157anti-parallel
Strand 3
C
185 189anti-parallel
Strand 4
C
200 201anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
25 33first strand
Strand 2
E
4 12parallel
Strand 3
F
141 153anti-parallel
Strand 4
F
62 68anti-parallel
Strand 5
F
115 116anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
16 20first strand
Strand 2
E
47 56anti-parallel
Strand 3
E
123 133anti-parallel
Strand 4
E
91 96anti-parallel
Strand 5
E
79 80anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
22 31first strand
Strand 2
F
3 12parallel
Strand 3
G
131 144anti-parallel
Strand 4
G
60 66anti-parallel
Strand 5
G
101 105anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
16 18first strand
Strand 2
F
47 56anti-parallel
Strand 3
F
123 133anti-parallel
Strand 4
F
91 97anti-parallel
Strand 5
F
75 80anti-parallel
Strand 6
F
71 72anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
167 171first strand
Strand 2
G
3 11parallel
Strand 3
H
266 278anti-parallel
Strand 4
H
191 198anti-parallel
Strand 5
H
238 243anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
17 18first strand
Strand 2
G
45 52anti-parallel
Strand 3
G
113 123anti-parallel
Strand 4
G
40 41anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
17 18first strand
Strand 2
G
45 52anti-parallel
Strand 3
G
113 123anti-parallel
Strand 4
G
85 89anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 11first strand
Strand 2
H
2 5anti-parallel
Strand 3
H
42 45anti-parallel
Strand 4
H
101 102anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
17 22first strand
Strand 2
H
141 150parallel
Strand 3
H
125 135anti-parallel
Strand 4
H
63 64anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
17 22first strand
Strand 2
H
141 150parallel
Strand 3
H
125 135anti-parallel
Strand 4
H
54 58anti-parallel
Strand 5
H
93 95anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
27 28first strand
Strand 2
H
33 37anti-parallel
Strand 3
H
106 109anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
73 77first strand
Strand 2
H
80 84anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
117 120first strand
Strand 2
H
154 157anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
161 163first strand
Strand 2
H
184 187anti-parallel
Strand 3
H
248 249anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
178 180first strand
Strand 2
H
252 258anti-parallel
Strand 3
H
221 227anti-parallel
Strand 4
H
230 231anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
2 4first strand
Strand 2
I
18 24anti-parallel
Strand 3
I
61 69anti-parallel
Strand 4
I
48 51anti-parallel
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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
8 12first strand
Strand 2
I
102 116parallel
Strand 3
K
23 24anti-parallel
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There are 7 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
54 58first strand
Strand 2
I
30 39anti-parallel
Strand 3
I
81 91anti-parallel
Strand 4
I
102 116anti-parallel
Strand 5
K
145 153parallel
Strand 6
K
62 68anti-parallel
Strand 7
K
114 116anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
171 176first strand
Strand 2
I
139 144anti-parallel
Strand 3
I
132 136anti-parallel
Strand 4
I
203 204parallel
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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
160 161first strand
Strand 2
I
150 157anti-parallel
Strand 3
I
165 167anti-parallel
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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
160 161first strand
Strand 2
I
150 157anti-parallel
Strand 3
I
185 189anti-parallel
Strand 4
I
200 201anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
24 31first strand
Strand 2
K
3 10parallel
Strand 3
L
142 153anti-parallel
Strand 4
L
62 68anti-parallel
Strand 5
L
115 116anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
16 20first strand
Strand 2
K
47 56anti-parallel
Strand 3
K
123 133anti-parallel
Strand 4
K
91 96anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
22 31first strand
Strand 2
L
3 12parallel
Strand 3
M
131 144anti-parallel
Strand 4
M
60 66anti-parallel
Strand 5
M
101 105anti-parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
16 18first strand
Strand 2
L
47 56anti-parallel
Strand 3
L
123 133anti-parallel
Strand 4
L
91 96anti-parallel
Strand 5
L
79 80anti-parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
170 171first strand
Strand 2
M
3 11parallel
Strand 3
N
266 278anti-parallel
Strand 4
N
191 198anti-parallel
Strand 5
N
238 243anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
17 18first strand
Strand 2
M
45 52anti-parallel
Strand 3
M
113 123anti-parallel
Strand 4
M
40 41anti-parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
17 18first strand
Strand 2
M
45 52anti-parallel
Strand 3
M
113 123anti-parallel
Strand 4
M
85 90anti-parallel
Strand 5
M
75 76anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
2 5first strand
Strand 2
N
42 45anti-parallel
Strand 3
N
101 102anti-parallel
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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
17 22first strand
Strand 2
N
141 150parallel
Strand 3
N
125 135anti-parallel
Strand 4
N
63 64anti-parallel
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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
17 22first strand
Strand 2
N
141 150parallel
Strand 3
N
125 135anti-parallel
Strand 4
N
54 58anti-parallel
Strand 5
N
93 95anti-parallel
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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
33 37first strand
Strand 2
N
105 109anti-parallel
Strand 3
N
73 77anti-parallel
Strand 4
N
80 84anti-parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
117 120first strand
Strand 2
N
154 157anti-parallel
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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
161 163first strand
Strand 2
N
184 187anti-parallel
Strand 3
N
248 249anti-parallel
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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
178 180first strand
Strand 2
N
253 258anti-parallel
Strand 3
N
221 227anti-parallel
Strand 4
N
230 231anti-parallel
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