Analysis of interatomic Contacts of Structural Units in PDB entry:
3JWP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JWP entry

There is 1 chain in PDB entry 3JWP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2GLY 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3JWP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 20Right-handed alpha
Helix 2
2
A
29 36Right-handed 310
Helix 3
3
A
46 50Right-handed 310
Helix 4
4
A
52 57Right-handed alpha
Helix 5
5
A
58 65Right-handed alpha
Helix 6
6
A
67 80Right-handed alpha
Helix 7
7
A
85 97Right-handed alpha
Helix 8
8
A
110 116Right-handed alpha
Helix 9
9
A
142 147Right-handed alpha
Helix 10
10
A
178 191Right-handed alpha
Helix 11
11
A
205 217Right-handed alpha
Helix 12
12
A
243 246Right-handed 310
Helix 13
13
A
247 256Right-handed alpha
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There are 2 sheets in PDB entry 3JWP. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
238 241parallel
Strand 3
A
221 225parallel
Strand 4
A
194 198parallel
Strand 5
A
23 27parallel
Strand 6
A
100 105parallel
Strand 7
A
120 122parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 140first strand
Strand 2
A
125 132anti-parallel
Strand 3
A
166 170anti-parallel
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