Analysis of interatomic Contacts of Structural Units in PDB entry:
3JXH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JXH entry

There is 1 chain in PDB entry 3JXH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 PRO 58SER 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3JXH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
63 69Right-handed 310
Helix 2
2
C
70 75Right-handed alpha
Helix 3
3
C
76 80Right-handed 310
Helix 4
4
C
89 93Right-handed 310
Helix 5
5
C
186 193Right-handed alpha
Helix 6
6
C
211 213Right-handed 310
Helix 7
7
C
214 224Right-handed alpha
Helix 8
8
C
237 242Right-handed 310
Helix 9
9
C
278 286Right-handed alpha
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There are 4 sheets in PDB entry 3JXH. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 88first strand
Strand 2
C
164 165parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 105first strand
Strand 2
C
133 135anti-parallel
Strand 3
C
143 152anti-parallel
Strand 4
C
172 179anti-parallel
Strand 5
C
197 207anti-parallel
Strand 6
C
274 277parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
230 232first strand
Strand 2
C
116 119anti-parallel
Strand 3
C
124 127anti-parallel
Strand 4
C
143 152anti-parallel
Strand 5
C
172 179anti-parallel
Strand 6
C
197 207anti-parallel
Strand 7
C
265 270parallel
Strand 8
C
249 254anti-parallel
Strand 9
C
318 319anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
288 289first strand
Strand 2
C
300 301anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il