Analysis of interatomic Contacts of Structural Units in PDB entry:
3JXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JXJ entry

There are 2 chains in PDB entry 3JXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 132HIS 388
B
 MET 132HIS 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3JXJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
136 147Right-handed alpha
Helix 2
2
A
148 153Right-handed 310
Helix 3
3
A
154 163Right-handed alpha
Helix 4
4
A
168 172Right-handed 310
Helix 5
5
A
179 187Right-handed alpha
Helix 6
6
A
195 206Right-handed alpha
Helix 7
7
A
208 214Right-handed alpha
Helix 8
8
A
226 234Right-handed alpha
Helix 9
9
A
236 246Right-handed alpha
Helix 10
10
A
273 280Right-handed alpha
Helix 11
11
A
283 293Right-handed alpha
Helix 12
12
A
309 318Right-handed alpha
Helix 13
13
A
321 343Right-handed alpha
Helix 14
14
A
347 351Right-handed 310
Helix 15
15
A
358 367Right-handed alpha
Helix 16
16
A
368 383Right-handed alpha
Helix 17
17
B
136 147Right-handed alpha
Helix 18
18
B
149 153Right-handed 310
Helix 19
19
B
154 162Right-handed alpha
Helix 20
20
B
168 172Right-handed 310
Helix 21
21
B
179 187Right-handed alpha
Helix 22
22
B
194 206Right-handed alpha
Helix 23
23
B
208 214Right-handed alpha
Helix 24
24
B
226 234Right-handed alpha
Helix 25
25
B
236 246Right-handed alpha
Helix 26
26
B
273 281Right-handed alpha
Helix 27
27
B
283 293Right-handed alpha
Helix 28
28
B
309 318Right-handed alpha
Helix 29
29
B
321 343Right-handed alpha
Helix 30
30
B
347 351Right-handed 310
Helix 31
31
B
358 366Right-handed alpha
Helix 32
32
B
368 384Right-handed alpha
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There are 2 sheets in PDB entry 3JXJ. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
255 256anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 223first strand
Strand 2
B
255 256anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il