Analysis of interatomic Contacts of Structural Units in PDB entry:
3JY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JY1 entry

There are 4 chains in PDB entry 3JY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 0TYR 225
B
 T 1 G 4
B
 G 6 T 10
C
 A 11 C 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3JY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 15Right-handed alpha
Helix 2
2
A
17 28Right-handed alpha
Helix 3
3
A
38 54Right-handed alpha
Helix 4
4
A
57 59Right-handed 310
Helix 5
5
A
60 71Right-handed alpha
Helix 6
6
A
73 87Right-handed alpha
Helix 7
7
A
88 91Right-handed 310
Helix 8
8
A
92 94Right-handed 310
Helix 9
9
A
95 105Right-handed alpha
Helix 10
10
A
108 116Right-handed alpha
Helix 11
11
A
118 127Right-handed alpha
Helix 12
12
A
130 141Right-handed alpha
Helix 13
13
A
143 153Right-handed alpha
Helix 14
14
A
157 161Right-handed 310
Helix 15
15
A
162 174Right-handed alpha
Helix 16
16
A
178 194Right-handed alpha
Helix 17
17
A
196 207Right-handed alpha
Helix 18
18
A
210 219Right-handed alpha
Helix 19
19
A
221 225Right-handed 310
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There are no sheets in PDB entry 3JY1
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il