Analysis of interatomic Contacts of Structural Units in PDB entry:
3JZ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JZ3 entry

There are 2 chains in PDB entry 3JZ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 275HIS 452
B
 ALA 262GLU 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3JZ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
283 297Right-handed alpha
Helix 2
2
A
313 331Right-handed alpha
Helix 3
3
A
350 367Right-handed alpha
Helix 4
4
A
418 429Right-handed alpha
Helix 5
5
B
277 297Right-handed alpha
Helix 6
6
B
313 331Right-handed alpha
Helix 7
7
B
350 366Right-handed alpha
Helix 8
8
B
421 429Right-handed alpha
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There are 5 sheets in PDB entry 3JZ3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 279first strand
Strand 2
B
266 269parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 312first strand
Strand 2
A
345 348anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 339first strand
Strand 2
A
373 379parallel
Strand 3
A
382 387anti-parallel
Strand 4
A
441 448anti-parallel
Strand 5
A
432 438anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 312first strand
Strand 2
B
345 348anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
334 339first strand
Strand 2
B
373 379parallel
Strand 3
B
382 387anti-parallel
Strand 4
B
441 448anti-parallel
Strand 5
B
432 438anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il