Analysis of interatomic Contacts of Structural Units in PDB entry:
3JZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JZA entry

There are 2 chains in PDB entry 3JZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4MET 173
B
 VAL 340TYR 532
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3JZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 25Right-handed 310
Helix 2
2
A
35 42Right-handed alpha
Helix 3
3
A
66 70Right-handed 310
Helix 4
4
A
74 79Right-handed alpha
Helix 5
5
A
92 110Right-handed alpha
Helix 6
6
A
132 144Right-handed alpha
Helix 7
7
A
155 173Right-handed alpha
Helix 8
8
B
341 362Right-handed alpha
Helix 9
9
B
364 382Right-handed alpha
Helix 10
10
B
385 390Right-handed alpha
Helix 11
11
B
391 394Right-handed 310
Helix 12
12
B
399 420Right-handed alpha
Helix 13
13
B
427 448Right-handed alpha
Helix 14
14
B
457 461Right-handed 310
Helix 15
15
B
463 479Right-handed alpha
Helix 16
16
B
490 507Right-handed alpha
Helix 17
17
B
511 521Right-handed alpha
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There are 2 sheets in PDB entry 3JZA. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 52first strand
Strand 2
A
55 63anti-parallel
Strand 3
A
7 14parallel
Strand 4
A
83 89parallel
Strand 5
A
115 121parallel
Strand 6
A
147 150parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
484 485first strand
Strand 2
B
488 489anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il