Analysis of interatomic Contacts of Structural Units in PDB entry:
3JZC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JZC entry

There are 5 chains in PDB entry 3JZC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 202PHE 293
A
 GLU 295PRO 297
A
 GLU 299ALA 387
A
 VAL 389ALA 433
A
 HIS 435GLU 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3JZC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
202 209Right-handed alpha
Helix 2
2
A
215 231Right-handed alpha
Helix 3
3
A
265 289Right-handed alpha
Helix 4
4
A
290 295Right-handed alpha
Helix 5
5
A
297 319Right-handed alpha
Helix 6
6
A
337 344Right-handed alpha
Helix 7
7
A
347 361Right-handed alpha
Helix 8
8
A
362 364Right-handed 310
Helix 9
9
A
366 379Right-handed alpha
Helix 10
10
A
388 411Right-handed alpha
Helix 11
11
A
416 445Right-handed alpha
Helix 12
12
A
447 451Right-handed 310
Helix 13
13
A
452 460Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3JZC.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
334 336parallel
Strand 3
A
328 330anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il