Analysis of interatomic Contacts of Structural Units in PDB entry:
3JZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JZE entry

There are 8 chains in PDB entry 3JZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ALA 102
A
 LEU 104LYS 348
B
 GLN 6ALA 102
B
 LEU 104LYS 347
C
 SER 5ALA 102
C
 LEU 104LYS 348
D
 GLN 6ALA 102
D
 LEU 104LYS 347
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 3JZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 35Right-handed alpha
Helix 2
2
A
52 66Right-handed alpha
Helix 3
3
A
86 96Right-handed alpha
Helix 4
4
A
120 122Right-handed 310
Helix 5
5
A
123 134Right-handed alpha
Helix 6
6
A
149 151Right-handed 310
Helix 7
7
A
152 161Right-handed alpha
Helix 8
8
A
161 169Right-handed alpha
Helix 9
9
A
181 190Right-handed alpha
Helix 10
10
A
200 206Right-handed alpha
Helix 11
11
A
207 213Right-handed alpha
Helix 12
12
A
217 221Right-handed 310
Helix 13
13
A
228 241Right-handed alpha
Helix 14
14
A
256 261Right-handed alpha
Helix 15
15
A
274 286Right-handed alpha
Helix 16
16
A
288 290Right-handed 310
Helix 17
17
A
291 298Right-handed alpha
Helix 18
18
A
298 305Right-handed alpha
Helix 19
19
B
22 35Right-handed alpha
Helix 20
20
B
52 66Right-handed alpha
Helix 21
21
B
86 96Right-handed alpha
Helix 22
22
B
120 122Right-handed 310
Helix 23
23
B
123 134Right-handed alpha
Helix 24
24
B
149 151Right-handed 310
Helix 25
25
B
152 161Right-handed alpha
Helix 26
26
B
161 169Right-handed alpha
Helix 27
27
B
181 190Right-handed alpha
Helix 28
28
B
200 206Right-handed alpha
Helix 29
29
B
207 213Right-handed alpha
Helix 30
30
B
217 221Right-handed 310
Helix 31
31
B
228 241Right-handed alpha
Helix 32
32
B
256 261Right-handed alpha
Helix 33
33
B
274 286Right-handed alpha
Helix 34
34
B
288 290Right-handed 310
Helix 35
35
B
291 298Right-handed alpha
Helix 36
36
B
298 305Right-handed alpha
Helix 37
37
C
22 35Right-handed alpha
Helix 38
38
C
52 67Right-handed alpha
Helix 39
39
C
86 96Right-handed alpha
Helix 40
40
C
123 134Right-handed alpha
Helix 41
41
C
149 151Right-handed 310
Helix 42
42
C
152 161Right-handed alpha
Helix 43
43
C
161 169Right-handed alpha
Helix 44
44
C
181 191Right-handed alpha
Helix 45
45
C
200 206Right-handed alpha
Helix 46
46
C
207 213Right-handed alpha
Helix 47
47
C
217 221Right-handed 310
Helix 48
48
C
228 241Right-handed alpha
Helix 49
49
C
256 261Right-handed alpha
Helix 50
50
C
274 286Right-handed alpha
Helix 51
51
C
288 290Right-handed 310
Helix 52
52
C
291 298Right-handed alpha
Helix 53
53
C
298 305Right-handed alpha
Helix 54
54
D
22 35Right-handed alpha
Helix 55
55
D
52 67Right-handed alpha
Helix 56
56
D
86 96Right-handed alpha
Helix 57
57
D
120 122Right-handed 310
Helix 58
58
D
123 134Right-handed alpha
Helix 59
59
D
149 151Right-handed 310
Helix 60
60
D
152 161Right-handed alpha
Helix 61
61
D
161 169Right-handed alpha
Helix 62
62
D
181 190Right-handed alpha
Helix 63
63
D
200 206Right-handed alpha
Helix 64
64
D
207 213Right-handed alpha
Helix 65
65
D
217 221Right-handed 310
Helix 66
66
D
228 241Right-handed alpha
Helix 67
67
D
256 261Right-handed alpha
Helix 68
68
D
274 286Right-handed alpha
Helix 69
69
D
288 290Right-handed 310
Helix 70
70
D
291 298Right-handed alpha
Helix 71
71
D
298 305Right-handed alpha
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There are 16 sheets in PDB entry 3JZE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
312 316anti-parallel
Strand 3
A
345 346anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
39 42parallel
Strand 3
A
74 80parallel
Strand 4
A
99 104parallel
Strand 5
A
137 139parallel
Strand 6
A
174 176parallel
Strand 7
A
195 199parallel
Strand 8
A
246 248parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 321first strand
Strand 2
A
341 342anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 327first strand
Strand 2
A
332 333anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 11first strand
Strand 2
B
312 316anti-parallel
Strand 3
B
345 346anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 18first strand
Strand 2
B
39 42parallel
Strand 3
B
74 80parallel
Strand 4
B
99 104parallel
Strand 5
B
137 139parallel
Strand 6
B
174 176parallel
Strand 7
B
195 199parallel
Strand 8
B
246 248parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
320 321first strand
Strand 2
B
341 342anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
326 327first strand
Strand 2
B
332 333anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
7 11first strand
Strand 2
C
312 316anti-parallel
Strand 3
C
345 346anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 18first strand
Strand 2
C
39 42parallel
Strand 3
C
74 80parallel
Strand 4
C
99 104parallel
Strand 5
C
137 139parallel
Strand 6
C
174 176parallel
Strand 7
C
195 199parallel
Strand 8
C
246 248parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
320 321first strand
Strand 2
C
341 342anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
326 327first strand
Strand 2
C
332 333anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
7 11first strand
Strand 2
D
312 316anti-parallel
Strand 3
D
345 346anti-parallel
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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 18first strand
Strand 2
D
39 42parallel
Strand 3
D
74 80parallel
Strand 4
D
99 104parallel
Strand 5
D
137 139parallel
Strand 6
D
174 176parallel
Strand 7
D
195 199parallel
Strand 8
D
246 248parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
320 321first strand
Strand 2
D
341 342anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
326 327first strand
Strand 2
D
332 333anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il