Analysis of interatomic Contacts of Structural Units in PDB entry:
3JZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JZJ entry

There is 1 chain in PDB entry 3JZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 17LYS 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3JZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 42Right-handed alpha
Helix 2
2
A
42 47Right-handed alpha
Helix 3
3
A
58 72Right-handed alpha
Helix 4
4
A
85 92Right-handed alpha
Helix 5
5
A
107 111Right-handed 310
Helix 6
6
A
112 118Right-handed alpha
Helix 7
7
A
141 147Right-handed alpha
Helix 8
8
A
154 170Right-handed alpha
Helix 9
9
A
180 182Right-handed 310
Helix 10
10
A
183 191Right-handed alpha
Helix 11
11
A
207 223Right-handed alpha
Helix 12
12
A
232 243Right-handed alpha
Helix 13
13
A
252 254Right-handed 310
Helix 14
14
A
255 261Right-handed alpha
Helix 15
15
A
262 266Right-handed 310
Helix 16
16
A
267 269Right-handed 310
Helix 17
17
A
300 312Right-handed alpha
Helix 18
18
A
313 325Right-handed alpha
Helix 19
19
A
330 335Right-handed alpha
Helix 20
20
A
336 341Right-handed alpha
Helix 21
21
A
342 355Right-handed alpha
Helix 22
22
A
363 366Right-handed 310
Helix 23
23
A
367 380Right-handed alpha
Helix 24
24
A
384 400Right-handed alpha
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There are 4 sheets in PDB entry 3JZJ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 56first strand
Strand 2
A
20 26parallel
Strand 3
A
79 83parallel
Strand 4
A
287 294anti-parallel
Strand 5
A
128 134anti-parallel
Strand 6
A
327 328anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
124 125anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
172 175parallel
Strand 3
A
246 251parallel
Strand 4
A
136 140anti-parallel
Strand 5
A
271 274anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
202 203anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il