Analysis of interatomic Contacts of Structural Units in PDB entry:
3K0E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3K0E entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 12 chains in PDB entry 3K0E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 14ILE 430
A
 ILE 433SER 519
B
 GLU 14ILE 430
B
 ILE 433GLU 504
C
 GLU 14ILE 430
C
 ILE 433GLU 501
D
 GLU 14ILE 430
D
 ILE 433THR 498
E
 GLU 14ILE 430
E
 ILE 433LEU 505
F
 GLU 14ILE 430
F
 ILE 433SER 519
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 3K0E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 68Right-handed alpha
Helix 2
2
A
79 90Right-handed alpha
Helix 3
3
A
94 100Right-handed alpha
Helix 4
4
A
121 138Right-handed alpha
Helix 5
5
A
147 152Right-handed alpha
Helix 6
6
A
156 175Right-handed alpha
Helix 7
7
A
196 201Right-handed alpha
Helix 8
8
A
267 275Right-handed alpha
Helix 9
9
A
293 307Right-handed alpha
Helix 10
10
A
320 331Right-handed alpha
Helix 11
11
A
335 340Right-handed alpha
Helix 12
12
A
355 369Right-handed alpha
Helix 13
13
A
379 383Right-handed 310
Helix 14
14
A
389 406Right-handed alpha
Helix 15
15
A
488 492Right-handed 310
Helix 16
16
A
511 515Right-handed 310
Helix 17
17
B
27 32Right-handed alpha
Helix 18
18
B
51 68Right-handed alpha
Helix 19
19
B
79 88Right-handed alpha
Helix 20
20
B
93 100Right-handed alpha
Helix 21
21
B
119 138Right-handed alpha
Helix 22
22
B
147 152Right-handed alpha
Helix 23
23
B
156 175Right-handed alpha
Helix 24
24
B
196 201Right-handed 310
Helix 25
25
B
267 274Right-handed alpha
Helix 26
26
B
293 308Right-handed alpha
Helix 27
27
B
320 332Right-handed alpha
Helix 28
28
B
334 341Right-handed alpha
Helix 29
29
B
350 354Right-handed 310
Helix 30
30
B
355 371Right-handed alpha
Helix 31
31
B
388 406Right-handed alpha
Helix 32
32
B
430 434Right-handed 310
Helix 33
33
C
27 33Right-handed alpha
Helix 34
34
C
52 65Right-handed alpha
Helix 35
35
C
79 86Right-handed alpha
Helix 36
36
C
87 90Right-handed 310
Helix 37
37
C
93 100Right-handed alpha
Helix 38
38
C
123 136Right-handed alpha
Helix 39
39
C
146 150Right-handed 310
Helix 40
40
C
156 166Right-handed alpha
Helix 41
41
C
167 174Right-handed alpha
Helix 42
42
C
196 201Right-handed alpha
Helix 43
43
C
267 274Right-handed alpha
Helix 44
44
C
293 308Right-handed alpha
Helix 45
45
C
320 332Right-handed alpha
Helix 46
46
C
334 339Right-handed alpha
Helix 47
47
C
350 354Right-handed 310
Helix 48
48
C
355 368Right-handed alpha
Helix 49
49
C
379 385Right-handed alpha
Helix 50
50
C
388 406Right-handed alpha
Helix 51
51
C
430 434Right-handed 310
Helix 52
52
D
27 32Right-handed alpha
Helix 53
53
D
51 68Right-handed alpha
Helix 54
54
D
79 88Right-handed alpha
Helix 55
55
D
89 91Right-handed 310
Helix 56
56
D
93 100Right-handed alpha
Helix 57
57
D
121 137Right-handed alpha
Helix 58
58
D
147 152Right-handed alpha
Helix 59
59
D
156 174Right-handed alpha
Helix 60
60
D
196 201Right-handed alpha
Helix 61
61
D
267 273Right-handed alpha
Helix 62
62
D
293 308Right-handed alpha
Helix 63
63
D
321 331Right-handed alpha
Helix 64
64
D
334 342Right-handed alpha
Helix 65
65
D
350 354Right-handed 310
Helix 66
66
D
356 371Right-handed alpha
Helix 67
67
D
388 406Right-handed alpha
Helix 68
68
E
27 32Right-handed alpha
Helix 69
69
E
51 67Right-handed alpha
Helix 70
70
E
79 88Right-handed alpha
Helix 71
71
E
89 91Right-handed 310
Helix 72
72
E
93 100Right-handed alpha
Helix 73
73
E
119 138Right-handed alpha
Helix 74
74
E
146 150Right-handed 310
Helix 75
75
E
156 175Right-handed alpha
Helix 76
76
E
196 201Right-handed alpha
Helix 77
77
E
267 274Right-handed alpha
Helix 78
78
E
293 307Right-handed alpha
Helix 79
79
E
321 331Right-handed alpha
Helix 80
80
E
334 341Right-handed alpha
Helix 81
81
E
350 354Right-handed 310
Helix 82
82
E
355 371Right-handed alpha
Helix 83
83
E
388 405Right-handed alpha
Helix 84
84
E
430 434Right-handed 310
Helix 85
85
F
27 32Right-handed alpha
Helix 86
86
F
51 66Right-handed alpha
Helix 87
87
F
79 87Right-handed alpha
Helix 88
88
F
93 100Right-handed alpha
Helix 89
89
F
120 137Right-handed alpha
Helix 90
90
F
147 152Right-handed alpha
Helix 91
91
F
156 175Right-handed alpha
Helix 92
92
F
196 201Right-handed alpha
Helix 93
93
F
269 274Right-handed alpha
Helix 94
94
F
293 308Right-handed alpha
Helix 95
95
F
322 331Right-handed alpha
Helix 96
96
F
334 341Right-handed alpha
Helix 97
97
F
350 354Right-handed 310
Helix 98
98
F
355 366Right-handed alpha
Helix 99
99
F
388 406Right-handed alpha
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There are 32 sheets in PDB entry 3K0E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
36 37anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
71 75parallel
Strand 3
A
141 145parallel
Strand 4
A
177 182parallel
Strand 5
A
42 45parallel
Strand 6
A
203 208parallel
Strand 7
A
219 225anti-parallel
Strand 8
A
234 240anti-parallel
Strand 9
A
243 246anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
312 316parallel
Strand 3
A
374 378parallel
Strand 4
A
409 414parallel
Strand 5
A
282 287parallel
Strand 6
A
436 440parallel
Strand 7
A
448 458anti-parallel
Strand 8
A
443 445anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
312 316parallel
Strand 3
A
374 378parallel
Strand 4
A
409 414parallel
Strand 5
A
282 287parallel
Strand 6
A
436 440parallel
Strand 7
A
448 458anti-parallel
Strand 8
A
468 472anti-parallel
Strand 9
A
477 482anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 106first strand
Strand 2
B
71 74parallel
Strand 3
B
141 144parallel
Strand 4
B
177 184parallel
Strand 5
B
41 47parallel
Strand 6
B
203 210parallel
Strand 7
B
217 225anti-parallel
Strand 8
B
235 238anti-parallel
Strand 9
B
245 246anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
278 279anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 346first strand
Strand 2
B
313 316parallel
Strand 3
B
375 378parallel
Strand 4
B
410 415parallel
Strand 5
B
283 288parallel
Strand 6
B
436 440parallel
Strand 7
B
449 458anti-parallel
Strand 8
B
443 444anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 346first strand
Strand 2
B
313 316parallel
Strand 3
B
375 378parallel
Strand 4
B
410 415parallel
Strand 5
B
283 288parallel
Strand 6
B
436 440parallel
Strand 7
B
449 458anti-parallel
Strand 8
B
468 471anti-parallel
Strand 9
B
478 482anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 21first strand
Strand 2
C
36 37anti-parallel
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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 105first strand
Strand 2
C
71 75parallel
Strand 3
C
141 145parallel
Strand 4
C
177 181parallel
Strand 5
C
41 46parallel
Strand 6
C
203 210parallel
Strand 7
C
217 225anti-parallel
Strand 8
C
235 240anti-parallel
Strand 9
C
243 246anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
345 346first strand
Strand 2
C
312 316parallel
Strand 3
C
374 378parallel
Strand 4
C
409 412parallel
Strand 5
C
283 288parallel
Strand 6
C
436 444parallel
Strand 7
C
449 452anti-parallel
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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
345 346first strand
Strand 2
C
312 316parallel
Strand 3
C
374 378parallel
Strand 4
C
409 412parallel
Strand 5
C
283 288parallel
Strand 6
C
436 444parallel
Strand 7
C
455 458anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
468 473first strand
Strand 2
C
476 482anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
486 487first strand
Strand 2
C
495 496anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
20 21first strand
Strand 2
D
36 37anti-parallel
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There are 8 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 107first strand
Strand 2
D
71 75parallel
Strand 3
D
141 145parallel
Strand 4
D
177 183parallel
Strand 5
D
41 46parallel
Strand 6
D
203 207parallel
Strand 7
D
219 225anti-parallel
Strand 8
D
234 236anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
210 212first strand
Strand 2
D
215 217anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
262 263first strand
Strand 2
D
278 279anti-parallel
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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
344 346first strand
Strand 2
D
312 315parallel
Strand 3
D
374 377parallel
Strand 4
D
409 413parallel
Strand 5
D
283 287parallel
Strand 6
D
436 439parallel
Strand 7
D
455 458anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
441 445first strand
Strand 2
D
448 452anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
468 473first strand
Strand 2
D
476 482anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
20 21first strand
Strand 2
E
36 37anti-parallel
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There are 9 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
103 107first strand
Strand 2
E
71 75parallel
Strand 3
E
141 145parallel
Strand 4
E
177 184parallel
Strand 5
E
42 47parallel
Strand 6
E
203 210parallel
Strand 7
E
217 225anti-parallel
Strand 8
E
235 240anti-parallel
Strand 9
E
243 246anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
262 263first strand
Strand 2
E
278 279anti-parallel
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There are 7 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
344 346first strand
Strand 2
E
312 316parallel
Strand 3
E
374 378parallel
Strand 4
E
409 413parallel
Strand 5
E
283 287parallel
Strand 6
E
436 439parallel
Strand 7
E
455 457anti-parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
470 472first strand
Strand 2
E
477 479anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
486 487first strand
Strand 2
E
495 496anti-parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
103 107first strand
Strand 2
F
71 75parallel
Strand 3
F
141 145parallel
Strand 4
F
177 182parallel
Strand 5
F
41 46parallel
Strand 6
F
203 210parallel
Strand 7
F
217 225anti-parallel
Strand 8
F
235 240anti-parallel
Strand 9
F
243 246anti-parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
344 346first strand
Strand 2
F
312 316parallel
Strand 3
F
374 378parallel
Strand 4
F
409 416parallel
Strand 5
F
283 289parallel
Strand 6
F
436 441parallel
Strand 7
F
452 457anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
444 445first strand
Strand 2
F
448 449anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
470 471first strand
Strand 2
F
478 479anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
486 487first strand
Strand 2
F
495 496anti-parallel
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