Analysis of interatomic Contacts of Structural Units in PDB entry:
3K11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3K11 entry

There is 1 chain in PDB entry 3K11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 26SER 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3K11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 36Right-handed 310
Helix 2
2
A
48 66Right-handed alpha
Helix 3
3
A
101 119Right-handed alpha
Helix 4
4
A
120 149Right-handed alpha
Helix 5
5
A
152 160Right-handed alpha
Helix 6
6
A
163 166Right-handed 310
Helix 7
7
A
167 181Right-handed alpha
Helix 8
8
A
186 200Right-handed alpha
Helix 9
9
A
221 238Right-handed alpha
Helix 10
10
A
241 261Right-handed alpha
Helix 11
11
A
284 302Right-handed alpha
Helix 12
12
A
308 325Right-handed alpha
Helix 13
13
A
346 362Right-handed alpha
Helix 14
14
A
366 383Right-handed alpha
Helix 15
15
A
403 409Right-handed alpha
Helix 16
16
A
416 418Right-handed 310
Helix 17
17
A
419 437Right-handed alpha
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There are 4 sheets in PDB entry 3K11. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
71 73anti-parallel
Strand 3
A
90 92anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 220first strand
Strand 2
A
271 273anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 334first strand
Strand 2
A
344 345anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 442first strand
Strand 2
A
445 447anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il