Analysis of interatomic Contacts of Structural Units in PDB entry:
3K30


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3K30 entry

There are 2 chains in PDB entry 3K30 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7ALA 690
B
 VAL 7ALA 690
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 3K30. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 16Right-handed 310
Helix 2
2
A
42 56Right-handed alpha
Helix 3
3
A
69 73Right-handed 310
Helix 4
4
A
84 86Right-handed 310
Helix 5
5
A
87 101Right-handed alpha
Helix 6
6
A
112 116Right-handed 310
Helix 7
7
A
147 169Right-handed alpha
Helix 8
8
A
182 189Right-handed alpha
Helix 9
9
A
202 207Right-handed alpha
Helix 10
10
A
207 222Right-handed alpha
Helix 11
11
A
242 254Right-handed alpha
Helix 12
12
A
266 271Right-handed alpha
Helix 13
13
A
282 287Right-handed alpha
Helix 14
14
A
289 293Right-handed 310
Helix 15
15
A
305 315Right-handed alpha
Helix 16
16
A
324 330Right-handed alpha
Helix 17
17
A
332 339Right-handed alpha
Helix 18
18
A
341 345Right-handed 310
Helix 19
19
A
352 360Right-handed alpha
Helix 20
20
A
400 414Right-handed alpha
Helix 21
21
A
428 435Right-handed alpha
Helix 22
22
A
439 442Right-handed 310
Helix 23
23
A
443 455Right-handed alpha
Helix 24
24
A
468 475Right-handed alpha
Helix 25
25
A
511 517Right-handed alpha
Helix 26
26
A
535 547Right-handed alpha
Helix 27
27
A
561 568Right-handed 310
Helix 28
28
A
569 580Right-handed alpha
Helix 29
29
A
626 639Right-handed alpha
Helix 30
30
A
648 651Right-handed 310
Helix 31
31
A
655 670Right-handed alpha
Helix 32
32
B
10 16Right-handed 310
Helix 33
33
B
42 56Right-handed alpha
Helix 34
34
B
69 73Right-handed 310
Helix 35
35
B
84 86Right-handed 310
Helix 36
36
B
87 102Right-handed alpha
Helix 37
37
B
112 116Right-handed 310
Helix 38
38
B
147 169Right-handed alpha
Helix 39
39
B
182 189Right-handed alpha
Helix 40
40
B
202 207Right-handed alpha
Helix 41
41
B
207 222Right-handed alpha
Helix 42
42
B
242 254Right-handed alpha
Helix 43
43
B
266 271Right-handed alpha
Helix 44
44
B
282 287Right-handed alpha
Helix 45
45
B
289 293Right-handed 310
Helix 46
46
B
305 315Right-handed alpha
Helix 47
47
B
324 330Right-handed alpha
Helix 48
48
B
332 340Right-handed alpha
Helix 49
49
B
341 345Right-handed 310
Helix 50
50
B
352 360Right-handed alpha
Helix 51
51
B
374 379Right-handed alpha
Helix 52
52
B
400 414Right-handed alpha
Helix 53
53
B
428 435Right-handed alpha
Helix 54
54
B
439 442Right-handed 310
Helix 55
55
B
443 455Right-handed alpha
Helix 56
56
B
468 475Right-handed alpha
Helix 57
57
B
511 517Right-handed alpha
Helix 58
58
B
535 547Right-handed alpha
Helix 59
59
B
561 566Right-handed 310
Helix 60
60
B
569 580Right-handed alpha
Helix 61
61
B
626 637Right-handed alpha
Helix 62
62
B
648 651Right-handed 310
Helix 63
63
B
655 670Right-handed alpha
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There are 14 sheets in PDB entry 3K30. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
23 24anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
60 67parallel
Strand 3
A
104 110parallel
Strand 4
A
172 177parallel
Strand 5
A
226 232parallel
Strand 6
A
259 263parallel
Strand 7
A
297 299parallel
Strand 8
A
320 323parallel
Strand 9
A
29 31parallel
Strand 10
A
60 67parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
144 145parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 462first strand
Strand 2
A
416 420parallel
Strand 3
A
393 397parallel
Strand 4
A
479 482parallel
Strand 5
A
643 646parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 488first strand
Strand 2
A
622 624anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 510first strand
Strand 2
A
615 619parallel
Strand 3
A
525 530parallel
Strand 4
A
550 555parallel
Strand 5
A
583 586parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 594first strand
Strand 2
A
597 602anti-parallel
Strand 3
A
608 612anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 20first strand
Strand 2
B
23 24anti-parallel
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There are 10 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 81first strand
Strand 2
B
60 67parallel
Strand 3
B
104 110parallel
Strand 4
B
172 177parallel
Strand 5
B
226 232parallel
Strand 6
B
259 263parallel
Strand 7
B
297 299parallel
Strand 8
B
320 323parallel
Strand 9
B
29 31parallel
Strand 10
B
60 67parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 127first strand
Strand 2
B
142 145parallel
Strand 3
B
131 132anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
459 462first strand
Strand 2
B
416 420parallel
Strand 3
B
393 397parallel
Strand 4
B
479 482parallel
Strand 5
B
643 646parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
486 488first strand
Strand 2
B
622 624anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
509 510first strand
Strand 2
B
615 619parallel
Strand 3
B
525 530parallel
Strand 4
B
550 555parallel
Strand 5
B
583 586parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
588 594first strand
Strand 2
B
597 602anti-parallel
Strand 3
B
608 612anti-parallel
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