Analysis of interatomic Contacts of Structural Units in PDB entry:
3K5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3K5Z entry

There are 2 chains in PDB entry 3K5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 168SER 567
B
 U 1 A 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 3K5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
169 173Right-handed 310
Helix 2
2
A
184 192Right-handed alpha
Helix 3
3
A
193 199Right-handed alpha
Helix 4
4
A
200 212Right-handed alpha
Helix 5
5
A
216 229Right-handed alpha
Helix 6
6
A
230 239Right-handed alpha
Helix 7
7
A
242 257Right-handed alpha
Helix 8
8
A
261 275Right-handed alpha
Helix 9
9
A
276 283Right-handed alpha
Helix 10
10
A
285 297Right-handed alpha
Helix 11
11
A
298 308Right-handed alpha
Helix 12
12
A
312 321Right-handed alpha
Helix 13
13
A
324 335Right-handed alpha
Helix 14
14
A
336 339Right-handed 310
Helix 15
15
A
340 349Right-handed alpha
Helix 16
16
A
349 358Right-handed alpha
Helix 17
17
A
361 373Right-handed alpha
Helix 18
18
A
376 380Right-handed 310
Helix 19
19
A
383 404Right-handed alpha
Helix 20
20
A
404 411Right-handed alpha
Helix 21
21
A
414 424Right-handed alpha
Helix 22
22
A
427 438Right-handed alpha
Helix 23
23
A
442 447Right-handed alpha
Helix 24
24
A
451 463Right-handed alpha
Helix 25
25
A
464 478Right-handed alpha
Helix 26
26
A
488 495Right-handed alpha
Helix 27
27
A
498 515Right-handed alpha
Helix 28
28
A
527 545Right-handed alpha
Helix 29
29
A
545 550Right-handed alpha
Helix 30
30
A
552 567Right-handed alpha
Back to top of page
There are no sheets in PDB entry 3K5Z
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il