Analysis of interatomic Contacts of Structural Units in PDB entry:
3K6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3K6Y entry

There is 1 chain in PDB entry 3K6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 171SER 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3K6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
188 193Right-handed 310
Helix 2
2
A
194 201Right-handed alpha
Helix 3
3
A
212 215Right-handed 310
Helix 4
4
A
233 237Right-handed 310
Helix 5
5
A
296 300Right-handed 310
Helix 6
6
A
374 379Right-handed alpha
Helix 7
7
A
380 384Right-handed 310
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There are 2 sheets in PDB entry 3K6Y. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 253first strand
Strand 2
A
242 247anti-parallel
Strand 3
A
204 211anti-parallel
Strand 4
A
216 226anti-parallel
Strand 5
A
229 232anti-parallel
Strand 6
A
265 269anti-parallel
Strand 7
A
255 260anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 295first strand
Strand 2
A
303 317anti-parallel
Strand 3
A
327 335anti-parallel
Strand 4
A
368 373anti-parallel
Strand 5
A
354 361anti-parallel
Strand 6
A
346 348anti-parallel
Strand 7
A
290 295anti-parallel
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