Analysis of interatomic Contacts of Structural Units in PDB entry:
3K8P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3K8P entry

There are 2 chains in PDB entry 3K8P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASN 333ALA 684
D
 GLY 30ALA 684
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 3K8P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
334 353Right-handed alpha
Helix 2
2
C
355 359Right-handed 310
Helix 3
3
C
429 447Right-handed alpha
Helix 4
4
C
453 476Right-handed alpha
Helix 5
5
C
478 493Right-handed alpha
Helix 6
6
C
496 532Right-handed alpha
Helix 7
7
C
538 544Right-handed alpha
Helix 8
8
C
544 552Right-handed alpha
Helix 9
9
C
552 559Right-handed alpha
Helix 10
10
C
562 576Right-handed alpha
Helix 11
11
C
577 584Right-handed alpha
Helix 12
12
C
589 607Right-handed alpha
Helix 13
13
C
608 613Right-handed 310
Helix 14
14
C
615 633Right-handed alpha
Helix 15
15
C
635 645Right-handed alpha
Helix 16
16
C
646 651Right-handed 310
Helix 17
17
C
652 664Right-handed alpha
Helix 18
18
C
667 684Right-handed alpha
Helix 19
19
D
32 43Right-handed alpha
Helix 20
20
D
48 52Right-handed 310
Helix 21
21
D
53 61Right-handed alpha
Helix 22
22
D
101 103Right-handed 310
Helix 23
23
D
104 112Right-handed alpha
Helix 24
24
D
119 133Right-handed alpha
Helix 25
25
D
142 148Right-handed alpha
Helix 26
26
D
155 165Right-handed alpha
Helix 27
27
D
165 176Right-handed alpha
Helix 28
28
D
181 188Right-handed alpha
Helix 29
29
D
189 198Right-handed alpha
Helix 30
30
D
211 217Right-handed alpha
Helix 31
31
D
217 226Right-handed alpha
Helix 32
32
D
227 236Right-handed alpha
Helix 33
33
D
245 262Right-handed alpha
Helix 34
34
D
269 290Right-handed alpha
Helix 35
35
D
293 306Right-handed alpha
Helix 36
36
D
322 335Right-handed alpha
Helix 37
37
D
340 349Right-handed alpha
Helix 38
38
D
351 368Right-handed alpha
Helix 39
39
D
372 383Right-handed alpha
Helix 40
40
D
398 413Right-handed alpha
Helix 41
41
D
415 426Right-handed alpha
Helix 42
42
D
431 449Right-handed alpha
Helix 43
43
D
456 478Right-handed alpha
Helix 44
44
D
478 495Right-handed alpha
Helix 45
45
D
514 521Right-handed alpha
Helix 46
46
D
525 536Right-handed alpha
Helix 47
47
D
538 541Right-handed 310
Helix 48
48
D
542 557Right-handed alpha
Helix 49
49
D
564 583Right-handed alpha
Helix 50
50
D
585 604Right-handed alpha
Helix 51
51
D
604 625Right-handed alpha
Helix 52
52
D
630 634Right-handed 310
Helix 53
53
D
636 654Right-handed alpha
Helix 54
54
D
655 657Right-handed 310
Helix 55
55
D
658 674Right-handed alpha
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There are 2 sheets in PDB entry 3K8P. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
362 365first strand
Strand 2
C
425 428anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
311 314first strand
Strand 2
D
318 321anti-parallel
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