Analysis of interatomic Contacts of Structural Units in PDB entry:
3K96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3K96 entry

There are 2 chains in PDB entry 3K96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3SER 328
B
 PRO 3ARG 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3K96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 26Right-handed alpha
Helix 2
2
A
37 48Right-handed alpha
Helix 3
3
A
68 74Right-handed alpha
Helix 4
4
A
84 96Right-handed alpha
Helix 5
5
A
97 99Right-handed 310
Helix 6
6
A
118 128Right-handed alpha
Helix 7
7
A
140 146Right-handed alpha
Helix 8
8
A
158 170Right-handed alpha
Helix 9
9
A
181 205Right-handed alpha
Helix 10
10
A
208 230Right-handed alpha
Helix 11
11
A
233 238Right-handed alpha
Helix 12
12
A
242 252Right-handed alpha
Helix 13
13
A
255 267Right-handed alpha
Helix 14
14
A
269 278Right-handed alpha
Helix 15
15
A
282 297Right-handed alpha
Helix 16
16
A
301 313Right-handed alpha
Helix 17
17
A
316 326Right-handed alpha
Helix 18
18
B
14 26Right-handed alpha
Helix 19
19
B
37 48Right-handed alpha
Helix 20
20
B
68 74Right-handed alpha
Helix 21
21
B
84 86Right-handed 310
Helix 22
22
B
87 96Right-handed alpha
Helix 23
23
B
119 128Right-handed alpha
Helix 24
24
B
140 146Right-handed alpha
Helix 25
25
B
158 170Right-handed alpha
Helix 26
26
B
181 205Right-handed alpha
Helix 27
27
B
208 231Right-handed alpha
Helix 28
28
B
233 238Right-handed alpha
Helix 29
29
B
242 252Right-handed alpha
Helix 30
30
B
255 266Right-handed alpha
Helix 31
31
B
269 278Right-handed alpha
Helix 32
32
B
281 297Right-handed alpha
Helix 33
33
B
301 313Right-handed alpha
Helix 34
34
B
316 326Right-handed alpha
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There are 3 sheets in PDB entry 3K96. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
31 34parallel
Strand 3
A
8 11parallel
Strand 4
A
78 81parallel
Strand 5
A
104 107parallel
Strand 6
A
132 136parallel
Strand 7
A
150 156anti-parallel
Strand 8
A
174 179parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 66first strand
Strand 2
B
31 34parallel
Strand 3
B
8 11parallel
Strand 4
B
78 81parallel
Strand 5
B
104 107parallel
Strand 6
B
132 136parallel
Strand 7
B
150 156anti-parallel
Strand 8
B
174 178parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 113first strand
Strand 2
B
117 118anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il