Analysis of interatomic Contacts of Structural Units in PDB entry:
3KBB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KBB entry

There is 1 chain in PDB entry 3KBB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LEU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3KBB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 17Right-handed 310
Helix 2
2
A
18 30Right-handed alpha
Helix 3
3
A
35 43Right-handed alpha
Helix 4
4
A
46 58Right-handed alpha
Helix 5
5
A
63 83Right-handed alpha
Helix 6
6
A
88 99Right-handed alpha
Helix 7
7
A
110 121Right-handed alpha
Helix 8
8
A
123 127Right-handed 310
Helix 9
9
A
132 136Right-handed 310
Helix 10
10
A
143 154Right-handed alpha
Helix 11
11
A
156 158Right-handed 310
Helix 12
12
A
166 176Right-handed alpha
Helix 13
13
A
191 197Right-handed alpha
Helix 14
14
A
204 206Right-handed 310
Helix 15
15
A
207 216Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3KBB.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 131first strand
Strand 2
A
102 106parallel
Strand 3
A
3 7parallel
Strand 4
A
160 164parallel
Strand 5
A
181 184parallel
Strand 6
A
201 203parallel
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