Analysis of interatomic Contacts of Structural Units in PDB entry:
3KFO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KFO entry

There is 1 chain in PDB entry 3KFO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 946GLU 1158
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3KFO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
950 966Right-handed alpha
Helix 2
2
A
972 976Right-handed 310
Helix 3
3
A
977 993Right-handed alpha
Helix 4
4
A
998 1007Right-handed alpha
Helix 5
5
A
1011 1026Right-handed alpha
Helix 6
6
A
1027 1029Right-handed 310
Helix 7
7
A
1030 1050Right-handed alpha
Helix 8
8
A
1055 1068Right-handed alpha
Helix 9
9
A
1069 1074Right-handed alpha
Helix 10
10
A
1080 1085Right-handed alpha
Helix 11
11
A
1086 1090Right-handed 310
Helix 12
12
A
1091 1100Right-handed alpha
Helix 13
13
A
1105 1124Right-handed alpha
Helix 14
14
A
1127 1142Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3KFO.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1076 1077first strand
Strand 2
A
1154 1157anti-parallel
Strand 3
A
1146 1149anti-parallel
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