Analysis of interatomic Contacts of Structural Units in PDB entry:
3KG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KG8 entry

There are 2 chains in PDB entry 3KG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 943MET 1244
B
 LYS 944LEU 1242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3KG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
972 976Right-handed 310
Helix 2
2
A
987 1003Right-handed alpha
Helix 3
3
A
1087 1095Right-handed alpha
Helix 4
4
A
1101 1111Right-handed alpha
Helix 5
5
A
1117 1120Right-handed 310
Helix 6
6
A
1144 1148Right-handed 310
Helix 7
7
A
1151 1161Right-handed alpha
Helix 8
8
A
1162 1166Right-handed 310
Helix 9
9
A
1238 1243Right-handed 310
Helix 10
10
B
972 976Right-handed 310
Helix 11
11
B
987 1001Right-handed alpha
Helix 12
12
B
1087 1095Right-handed alpha
Helix 13
13
B
1101 1111Right-handed alpha
Helix 14
14
B
1117 1120Right-handed 310
Helix 15
15
B
1151 1161Right-handed alpha
Helix 16
16
B
1162 1166Right-handed 310
Helix 17
17
B
1238 1242Right-handed 310
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There are 4 sheets in PDB entry 3KG8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 13 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
951 953first strand
Strand 2
A
961 967anti-parallel
Strand 3
A
1027 1036anti-parallel
Strand 4
A
1039 1047anti-parallel
Strand 5
A
1069 1078anti-parallel
Strand 6
A
1008 1014anti-parallel
Strand 7
A
1176 1187anti-parallel
Strand 8
A
1225 1237anti-parallel
Strand 9
A
1211 1219anti-parallel
Strand 10
A
1195 1204anti-parallel
Strand 11
A
1131 1137anti-parallel
Strand 12
A
1122 1127anti-parallel
Strand 13
A
1097 1099anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1019 1021first strand
Strand 2
A
983 986anti-parallel
Strand 3
A
978 980anti-parallel
Strand 4
A
1113 1115anti-parallel
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There are 13 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
951 953first strand
Strand 2
B
961 967anti-parallel
Strand 3
B
1027 1035anti-parallel
Strand 4
B
1040 1047anti-parallel
Strand 5
B
1069 1077anti-parallel
Strand 6
B
1008 1014anti-parallel
Strand 7
B
1176 1187anti-parallel
Strand 8
B
1225 1237anti-parallel
Strand 9
B
1211 1219anti-parallel
Strand 10
B
1195 1204anti-parallel
Strand 11
B
1131 1137anti-parallel
Strand 12
B
1122 1127anti-parallel
Strand 13
B
1097 1099anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1019 1021first strand
Strand 2
B
983 986anti-parallel
Strand 3
B
978 980anti-parallel
Strand 4
B
1113 1115anti-parallel
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