Analysis of interatomic Contacts of Structural Units in PDB entry:
3KLF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3KLF entry

There are 20 chains in PDB entry 3KLF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 2	ALA 554
B	SER 3	GLN 428
E	ILE 2	ALA 554
F	SER 3	GLN 428
I	ILE 2	ALA 554
J	SER 3	GLN 428
M	ILE 2	ALA 554
N	SER 3	GLN 428
C	G 703	G 725
D	C 803	G 816
D	C 818	C 821
G	G 703	G 725
H	C 803	G 816
H	C 818	C 821
K	G 703	G 725
L	C 803	G 816
L	C 818	C 821
O	G 703	G 725
P	C 803	G 816
P	C 818	C 821

There are131 helices in PDB entry 3KLF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	27	45	Right-handed alpha
Helix 2	2	A	77	84	Right-handed alpha
Helix 3	3	A	96	100	Right-handed 310
Helix 4	4	A	114	118	Right-handed 310
Helix 5	5	A	121	129	Right-handed 310
Helix 6	6	A	155	175	Right-handed alpha
Helix 7	7	A	194	211	Right-handed alpha
Helix 8	8	A	253	269	Right-handed alpha
Helix 9	9	A	276	282	Right-handed alpha
Helix 10	10	A	296	310	Right-handed alpha
Helix 11	11	A	363	383	Right-handed alpha
Helix 12	12	A	394	405	Right-handed alpha
Helix 13	13	A	473	488	Right-handed alpha
Helix 14	14	A	499	508	Right-handed alpha
Helix 15	15	A	515	528	Right-handed alpha
Helix 16	16	A	542	553	Right-handed alpha
Helix 17	17	B	27	44	Right-handed alpha
Helix 18	18	B	77	83	Right-handed alpha
Helix 19	19	B	84	90	Right-handed alpha
Helix 20	20	B	99	103	Right-handed 310
Helix 21	21	B	112	118	Right-handed 310
Helix 22	22	B	121	129	Right-handed 310
Helix 23	23	B	134	138	Right-handed 310
Helix 24	24	B	155	160	Right-handed alpha
Helix 25	25	B	160	175	Right-handed alpha
Helix 26	26	B	194	211	Right-handed alpha
Helix 27	27	B	235	239	Right-handed 310
Helix 28	28	B	254	268	Right-handed alpha
Helix 29	29	B	276	281	Right-handed alpha
Helix 30	30	B	296	310	Right-handed alpha
Helix 31	31	B	363	384	Right-handed alpha
Helix 32	32	B	394	406	Right-handed alpha
Helix 33	33	E	27	45	Right-handed alpha
Helix 34	34	E	77	84	Right-handed alpha
Helix 35	35	E	96	100	Right-handed 310
Helix 36	36	E	114	118	Right-handed 310
Helix 37	37	E	121	129	Right-handed 310
Helix 38	38	E	155	175	Right-handed alpha
Helix 39	39	E	194	211	Right-handed alpha
Helix 40	40	E	253	269	Right-handed alpha
Helix 41	41	E	276	282	Right-handed alpha
Helix 42	42	E	296	310	Right-handed alpha
Helix 43	43	E	363	383	Right-handed alpha
Helix 44	44	E	394	405	Right-handed alpha
Helix 45	45	E	473	488	Right-handed alpha
Helix 46	46	E	499	508	Right-handed alpha
Helix 47	47	E	515	528	Right-handed alpha
Helix 48	48	E	542	553	Right-handed alpha
Helix 49	49	F	27	44	Right-handed alpha
Helix 50	50	F	77	83	Right-handed alpha
Helix 51	51	F	84	90	Right-handed alpha
Helix 52	52	F	99	103	Right-handed 310
Helix 53	53	F	112	118	Right-handed 310
Helix 54	54	F	124	129	Right-handed 310
Helix 55	55	F	134	138	Right-handed 310
Helix 56	56	F	155	160	Right-handed alpha
Helix 57	57	F	160	175	Right-handed alpha
Helix 58	58	F	194	211	Right-handed alpha
Helix 59	59	F	235	239	Right-handed 310
Helix 60	60	F	254	267	Right-handed alpha
Helix 61	61	F	268	270	Right-handed 310
Helix 62	62	F	276	281	Right-handed alpha
Helix 63	63	F	296	310	Right-handed alpha
Helix 64	64	F	363	384	Right-handed alpha
Helix 65	65	F	394	406	Right-handed alpha
Helix 66	66	I	27	45	Right-handed alpha
Helix 67	67	I	77	84	Right-handed alpha
Helix 68	68	I	96	100	Right-handed 310
Helix 69	69	I	114	118	Right-handed 310
Helix 70	70	I	121	129	Right-handed 310
Helix 71	71	I	155	175	Right-handed alpha
Helix 72	72	I	194	211	Right-handed alpha
Helix 73	73	I	253	269	Right-handed alpha
Helix 74	74	I	276	282	Right-handed alpha
Helix 75	75	I	296	310	Right-handed alpha
Helix 76	76	I	363	384	Right-handed alpha
Helix 77	77	I	394	405	Right-handed alpha
Helix 78	78	I	473	488	Right-handed alpha
Helix 79	79	I	499	508	Right-handed alpha
Helix 80	80	I	515	528	Right-handed alpha
Helix 81	81	I	542	553	Right-handed alpha
Helix 82	82	J	27	44	Right-handed alpha
Helix 83	83	J	77	83	Right-handed alpha
Helix 84	84	J	84	90	Right-handed alpha
Helix 85	85	J	99	103	Right-handed 310
Helix 86	86	J	112	118	Right-handed 310
Helix 87	87	J	121	129	Right-handed 310
Helix 88	88	J	134	138	Right-handed 310
Helix 89	89	J	155	160	Right-handed alpha
Helix 90	90	J	160	175	Right-handed alpha
Helix 91	91	J	194	211	Right-handed alpha
Helix 92	92	J	235	239	Right-handed 310
Helix 93	93	J	254	268	Right-handed alpha
Helix 94	94	J	276	281	Right-handed alpha
Helix 95	95	J	282	284	Right-handed 310
Helix 96	96	J	296	310	Right-handed alpha
Helix 97	97	J	363	384	Right-handed alpha
Helix 98	98	J	394	406	Right-handed alpha
Helix 99	99	M	27	45	Right-handed alpha
Helix 100	100	M	77	84	Right-handed alpha
Helix 101	101	M	96	100	Right-handed 310
Helix 102	102	M	114	118	Right-handed 310
Helix 103	103	M	121	129	Right-handed 310
Helix 104	104	M	155	175	Right-handed alpha
Helix 105	105	M	194	211	Right-handed alpha
Helix 106	106	M	253	269	Right-handed alpha
Helix 107	107	M	276	281	Right-handed alpha
Helix 108	108	M	282	284	Right-handed 310
Helix 109	109	M	296	310	Right-handed alpha
Helix 110	110	M	363	384	Right-handed alpha
Helix 111	111	M	394	405	Right-handed alpha
Helix 112	112	M	473	488	Right-handed alpha
Helix 113	113	M	499	508	Right-handed alpha
Helix 114	114	M	515	528	Right-handed alpha
Helix 115	115	M	542	553	Right-handed alpha
Helix 116	116	N	27	44	Right-handed alpha
Helix 117	117	N	77	83	Right-handed alpha
Helix 118	118	N	84	90	Right-handed alpha
Helix 119	119	N	99	103	Right-handed 310
Helix 120	120	N	112	118	Right-handed 310
Helix 121	121	N	121	129	Right-handed 310
Helix 122	122	N	134	138	Right-handed 310
Helix 123	123	N	155	160	Right-handed alpha
Helix 124	124	N	160	175	Right-handed alpha
Helix 125	125	N	194	211	Right-handed alpha
Helix 126	126	N	235	239	Right-handed 310
Helix 127	127	N	254	268	Right-handed alpha
Helix 128	128	N	276	281	Right-handed alpha
Helix 129	129	N	296	310	Right-handed alpha
Helix 130	130	N	363	384	Right-handed alpha
Helix 131	131	N	394	406	Right-handed alpha

There are 52 sheets in PDB entry 3KLF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	49	first strand
Strand 2	A	142	146	anti-parallel
Strand 3	A	130	132	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	64	first strand
Strand 2	A	71	75	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	110	first strand
Strand 2	A	186	191	anti-parallel
Strand 3	A	179	183	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	229	first strand
Strand 2	A	232	234	anti-parallel
Strand 3	A	239	241	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	354	first strand
Strand 2	A	337	342	anti-parallel
Strand 3	A	326	331	anti-parallel
Strand 4	A	388	391	parallel
Strand 5	A	414	416	parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	512	513	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	439	441	first strand
Strand 2	A	494	497	parallel
Strand 3	A	533	535	parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	443	446	first strand
Strand 2	A	453	458	anti-parallel
Strand 3	A	464	469	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	50	first strand
Strand 2	B	142	146	anti-parallel
Strand 3	B	130	132	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	63	first strand
Strand 2	B	72	75	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	110	first strand
Strand 2	B	186	191	anti-parallel
Strand 3	B	179	183	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	253	first strand
Strand 2	B	292	293	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	352	first strand
Strand 2	B	336	342	anti-parallel
Strand 3	B	326	333	anti-parallel
Strand 4	B	388	391	parallel
Strand 5	B	413	416	parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	47	49	first strand
Strand 2	E	142	146	anti-parallel
Strand 3	E	130	132	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	64	first strand
Strand 2	E	71	75	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	105	110	first strand
Strand 2	E	186	191	anti-parallel
Strand 3	E	179	183	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	227	229	first strand
Strand 2	E	232	234	anti-parallel
Strand 3	E	239	241	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	348	354	first strand
Strand 2	E	337	342	anti-parallel
Strand 3	E	326	331	anti-parallel
Strand 4	E	388	391	parallel
Strand 5	E	414	416	parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	361	362	first strand
Strand 2	E	512	513	anti-parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	439	441	first strand
Strand 2	E	494	497	parallel
Strand 3	E	533	535	parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	443	446	first strand
Strand 2	E	453	458	anti-parallel
Strand 3	E	464	469	anti-parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	47	50	first strand
Strand 2	F	142	146	anti-parallel
Strand 3	F	130	132	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	60	63	first strand
Strand 2	F	72	75	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	105	110	first strand
Strand 2	F	186	191	anti-parallel
Strand 3	F	179	183	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	252	253	first strand
Strand 2	F	292	293	anti-parallel

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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	348	352	first strand
Strand 2	F	336	342	anti-parallel
Strand 3	F	326	333	anti-parallel
Strand 4	F	388	391	parallel
Strand 5	F	414	416	parallel

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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	47	49	first strand
Strand 2	I	142	146	anti-parallel
Strand 3	I	130	132	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	60	64	first strand
Strand 2	I	71	75	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	105	110	first strand
Strand 2	I	186	191	anti-parallel
Strand 3	I	179	183	anti-parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	227	229	first strand
Strand 2	I	232	234	anti-parallel
Strand 3	I	239	241	anti-parallel

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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	348	354	first strand
Strand 2	I	337	342	anti-parallel
Strand 3	I	326	331	anti-parallel
Strand 4	I	388	391	parallel
Strand 5	I	414	416	parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	361	362	first strand
Strand 2	I	512	513	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	439	441	first strand
Strand 2	I	494	497	parallel
Strand 3	I	533	535	parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	443	446	first strand
Strand 2	I	453	458	anti-parallel
Strand 3	I	464	469	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	47	50	first strand
Strand 2	J	142	146	anti-parallel
Strand 3	J	130	132	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	60	63	first strand
Strand 2	J	72	75	anti-parallel

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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	105	110	first strand
Strand 2	J	186	191	anti-parallel
Strand 3	J	179	183	anti-parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	252	253	first strand
Strand 2	J	292	293	anti-parallel

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There are 5 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	348	354	first strand
Strand 2	J	336	342	anti-parallel
Strand 3	J	326	333	anti-parallel
Strand 4	J	388	391	parallel
Strand 5	J	414	416	parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	47	49	first strand
Strand 2	M	142	146	anti-parallel
Strand 3	M	130	132	anti-parallel

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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	60	64	first strand
Strand 2	M	71	75	anti-parallel

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There are 3 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	105	110	first strand
Strand 2	M	186	191	anti-parallel
Strand 3	M	179	183	anti-parallel

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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	227	229	first strand
Strand 2	M	232	234	anti-parallel
Strand 3	M	239	241	anti-parallel

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There are 5 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	348	354	first strand
Strand 2	M	337	342	anti-parallel
Strand 3	M	326	331	anti-parallel
Strand 4	M	388	391	parallel
Strand 5	M	414	416	parallel

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There are 2 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	361	362	first strand
Strand 2	M	512	513	anti-parallel

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There are 3 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	439	441	first strand
Strand 2	M	494	497	parallel
Strand 3	M	533	535	parallel

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There are 3 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	443	446	first strand
Strand 2	M	453	458	anti-parallel
Strand 3	M	464	469	anti-parallel

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There are 3 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	47	50	first strand
Strand 2	N	142	146	anti-parallel
Strand 3	N	130	132	anti-parallel

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There are 2 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	60	63	first strand
Strand 2	N	72	75	anti-parallel

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There are 3 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	105	110	first strand
Strand 2	N	186	191	anti-parallel
Strand 3	N	179	183	anti-parallel

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There are 2 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	252	253	first strand
Strand 2	N	292	293	anti-parallel

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There are 5 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	348	352	first strand
Strand 2	N	336	342	anti-parallel
Strand 3	N	326	333	anti-parallel
Strand 4	N	388	391	parallel
Strand 5	N	413	416	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3KLF

Analysis of interatomic Contacts of Structural Units in PDB entry:
3KLF