Analysis of interatomic Contacts of Structural Units in PDB entry:
3KLO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KLO entry

There are 4 chains in PDB entry 3KLO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3ILE 219
B
 GLU 4ILE 219
C
 GLU 4ASN 216
D
 GLU 4ASN 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 3KLO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 30Right-handed alpha
Helix 2
2
A
38 40Right-handed 310
Helix 3
3
A
41 46Right-handed alpha
Helix 4
4
A
49 54Right-handed 310
Helix 5
5
A
62 64Right-handed 310
Helix 6
6
A
65 80Right-handed alpha
Helix 7
7
A
95 100Right-handed alpha
Helix 8
8
A
114 127Right-handed alpha
Helix 9
9
A
133 146Right-handed alpha
Helix 10
10
A
153 158Right-handed alpha
Helix 11
11
A
160 171Right-handed alpha
Helix 12
12
A
175 183Right-handed alpha
Helix 13
13
A
186 198Right-handed alpha
Helix 14
14
A
205 217Right-handed alpha
Helix 15
15
B
16 30Right-handed alpha
Helix 16
16
B
38 40Right-handed 310
Helix 17
17
B
41 46Right-handed alpha
Helix 18
18
B
48 54Right-handed 310
Helix 19
19
B
62 64Right-handed 310
Helix 20
20
B
65 67Right-handed 310
Helix 21
21
B
68 80Right-handed alpha
Helix 22
22
B
95 100Right-handed alpha
Helix 23
23
B
114 127Right-handed alpha
Helix 24
24
B
133 146Right-handed alpha
Helix 25
25
B
153 159Right-handed alpha
Helix 26
26
B
160 171Right-handed alpha
Helix 27
27
B
175 183Right-handed alpha
Helix 28
28
B
186 202Right-handed alpha
Helix 29
29
B
205 217Right-handed alpha
Helix 30
30
C
16 30Right-handed alpha
Helix 31
31
C
38 40Right-handed 310
Helix 32
32
C
41 46Right-handed alpha
Helix 33
33
C
48 54Right-handed 310
Helix 34
34
C
62 64Right-handed 310
Helix 35
35
C
65 67Right-handed 310
Helix 36
36
C
68 80Right-handed alpha
Helix 37
37
C
95 100Right-handed alpha
Helix 38
38
C
114 127Right-handed alpha
Helix 39
39
C
133 147Right-handed alpha
Helix 40
40
C
153 158Right-handed alpha
Helix 41
41
C
160 171Right-handed alpha
Helix 42
42
C
175 183Right-handed alpha
Helix 43
43
C
186 198Right-handed alpha
Helix 44
44
C
205 216Right-handed alpha
Helix 45
45
D
16 30Right-handed alpha
Helix 46
46
D
41 45Right-handed 310
Helix 47
47
D
48 54Right-handed 310
Helix 48
48
D
62 64Right-handed 310
Helix 49
49
D
66 80Right-handed alpha
Helix 50
50
D
95 102Right-handed 310
Helix 51
51
D
114 127Right-handed alpha
Helix 52
52
D
133 146Right-handed alpha
Helix 53
53
D
195 199Right-handed 310
Helix 54
54
D
205 215Right-handed alpha
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There are 4 sheets in PDB entry 3KLO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
7 12parallel
Strand 3
A
56 60parallel
Strand 4
A
84 90parallel
Strand 5
A
105 110parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
7 12parallel
Strand 3
B
56 60parallel
Strand 4
B
84 90parallel
Strand 5
B
105 110parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 37first strand
Strand 2
C
7 12parallel
Strand 3
C
56 60parallel
Strand 4
C
84 90parallel
Strand 5
C
105 110parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 37first strand
Strand 2
D
7 12parallel
Strand 3
D
56 60parallel
Strand 4
D
84 90parallel
Strand 5
D
105 110parallel
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