Analysis of interatomic Contacts of Structural Units in PDB entry:
3KNT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KNT entry

There are 16 chains in PDB entry 3KNT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 207
B
 MET 1LYS 207
C
 LEU 3LYS 207
D
 MET 2LYS 207
E
 A 16 A 22
E
 G 24 C 30
F
 T 1 G 15
G
 A 16 A 22
G
 G 24 A 28
H
 G 3 G 15
I
 A 16 A 22
I
 G 24 C 29
J
 G 3 G 15
K
 A 16 A 22
K
 G 24 C 30
L
 T 1 G 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 3KNT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 12Right-handed alpha
Helix 2
2
A
14 28Right-handed alpha
Helix 3
3
A
29 32Right-handed 310
Helix 4
4
A
33 48Right-handed alpha
Helix 5
5
A
51 63Right-handed alpha
Helix 6
6
A
64 67Right-handed 310
Helix 7
7
A
70 81Right-handed alpha
Helix 8
8
A
87 96Right-handed alpha
Helix 9
9
A
97 100Right-handed 310
Helix 10
10
A
101 109Right-handed alpha
Helix 11
11
A
112 123Right-handed alpha
Helix 12
12
A
128 138Right-handed alpha
Helix 13
13
A
147 157Right-handed alpha
Helix 14
14
A
168 185Right-handed alpha
Helix 15
15
A
189 203Right-handed alpha
Helix 16
16
B
1 12Right-handed alpha
Helix 17
17
B
14 28Right-handed alpha
Helix 18
18
B
29 31Right-handed 310
Helix 19
19
B
33 48Right-handed alpha
Helix 20
20
B
51 63Right-handed alpha
Helix 21
21
B
64 69Right-handed alpha
Helix 22
22
B
70 82Right-handed alpha
Helix 23
23
B
85 97Right-handed alpha
Helix 24
24
B
98 100Right-handed 310
Helix 25
25
B
101 108Right-handed alpha
Helix 26
26
B
111 123Right-handed alpha
Helix 27
27
B
127 138Right-handed alpha
Helix 28
28
B
147 155Right-handed alpha
Helix 29
29
B
156 158Right-handed 310
Helix 30
30
B
168 187Right-handed alpha
Helix 31
31
B
189 203Right-handed alpha
Helix 32
32
C
3 13Right-handed alpha
Helix 33
33
C
14 28Right-handed alpha
Helix 34
34
C
29 32Right-handed 310
Helix 35
35
C
33 46Right-handed alpha
Helix 36
36
C
51 63Right-handed alpha
Helix 37
37
C
64 69Right-handed alpha
Helix 38
38
C
70 81Right-handed alpha
Helix 39
39
C
85 96Right-handed alpha
Helix 40
40
C
97 100Right-handed 310
Helix 41
41
C
101 109Right-handed alpha
Helix 42
42
C
111 123Right-handed alpha
Helix 43
43
C
127 138Right-handed alpha
Helix 44
44
C
147 157Right-handed alpha
Helix 45
45
C
168 187Right-handed alpha
Helix 46
46
C
189 203Right-handed alpha
Helix 47
47
D
2 13Right-handed alpha
Helix 48
48
D
15 28Right-handed alpha
Helix 49
49
D
29 32Right-handed 310
Helix 50
50
D
33 48Right-handed alpha
Helix 51
51
D
51 63Right-handed alpha
Helix 52
52
D
64 68Right-handed 310
Helix 53
53
D
70 81Right-handed alpha
Helix 54
54
D
85 97Right-handed alpha
Helix 55
55
D
98 100Right-handed 310
Helix 56
56
D
101 107Right-handed alpha
Helix 57
57
D
111 123Right-handed alpha
Helix 58
58
D
127 138Right-handed alpha
Helix 59
59
D
147 157Right-handed alpha
Helix 60
60
D
168 186Right-handed alpha
Helix 61
61
D
189 202Right-handed alpha
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There are no sheets in PDB entry 3KNT
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