Analysis of interatomic Contacts of Structural Units in PDB entry:
3KP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KP0 entry

There are 8 chains in PDB entry 3KP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5PRO 587
E
 ASP 6GLN 114
B
 LEU 5ARG 740
F
 ASP 6GLN 114
C
 LEU 5ARG 740
G
 ASP 6GLN 114
D
 LEU 5PRO 587
H
 ASP 6GLN 114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are149 helices in PDB entry 3KP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 19Right-handed alpha
Helix 2
2
A
21 25Right-handed 310
Helix 3
3
A
61 68Right-handed 310
Helix 4
4
A
86 100Right-handed alpha
Helix 5
5
A
112 116Right-handed 310
Helix 6
6
A
133 152Right-handed alpha
Helix 7
7
A
165 176Right-handed alpha
Helix 8
8
A
184 191Right-handed alpha
Helix 9
9
A
195 213Right-handed alpha
Helix 10
10
A
224 229Right-handed 310
Helix 11
11
A
233 236Right-handed 310
Helix 12
12
A
237 256Right-handed alpha
Helix 13
13
A
258 260Right-handed 310
Helix 14
14
A
275 291Right-handed alpha
Helix 15
15
A
308 326Right-handed alpha
Helix 16
16
A
344 362Right-handed alpha
Helix 17
17
A
364 368Right-handed alpha
Helix 18
18
A
375 398Right-handed alpha
Helix 19
19
A
400 407Right-handed alpha
Helix 20
20
A
463 472Right-handed 310
Helix 21
21
A
479 483Right-handed 310
Helix 22
22
A
494 502Right-handed alpha
Helix 23
23
A
532 547Right-handed alpha
Helix 24
24
A
581 583Right-handed 310
Helix 25
25
E
6 11Right-handed alpha
Helix 26
26
E
12 14Right-handed 310
Helix 27
27
E
18 43Right-handed alpha
Helix 28
28
E
46 57Right-handed alpha
Helix 29
29
E
60 74Right-handed alpha
Helix 30
30
E
76 79Right-handed 310
Helix 31
31
E
80 92Right-handed alpha
Helix 32
32
E
95 105Right-handed alpha
Helix 33
33
E
108 113Right-handed alpha
Helix 34
34
B
14 20Right-handed alpha
Helix 35
35
B
21 25Right-handed 310
Helix 36
36
B
61 68Right-handed 310
Helix 37
37
B
86 100Right-handed alpha
Helix 38
38
B
112 116Right-handed 310
Helix 39
39
B
133 152Right-handed alpha
Helix 40
40
B
165 176Right-handed alpha
Helix 41
41
B
185 193Right-handed alpha
Helix 42
42
B
195 213Right-handed alpha
Helix 43
43
B
225 231Right-handed alpha
Helix 44
44
B
233 236Right-handed 310
Helix 45
45
B
237 256Right-handed alpha
Helix 46
46
B
258 260Right-handed 310
Helix 47
47
B
275 291Right-handed alpha
Helix 48
48
B
308 326Right-handed alpha
Helix 49
49
B
344 362Right-handed alpha
Helix 50
50
B
364 367Right-handed 310
Helix 51
51
B
375 398Right-handed alpha
Helix 52
52
B
400 407Right-handed alpha
Helix 53
53
B
467 473Right-handed 310
Helix 54
54
B
479 483Right-handed 310
Helix 55
55
B
494 501Right-handed alpha
Helix 56
56
B
502 506Right-handed 310
Helix 57
57
B
532 547Right-handed alpha
Helix 58
58
B
581 583Right-handed 310
Helix 59
59
B
593 604Right-handed alpha
Helix 60
60
B
619 625Right-handed alpha
Helix 61
61
B
632 637Right-handed 310
Helix 62
62
B
648 659Right-handed alpha
Helix 63
63
B
674 690Right-handed alpha
Helix 64
64
B
706 711Right-handed alpha
Helix 65
65
B
712 714Right-handed 310
Helix 66
66
B
724 738Right-handed alpha
Helix 67
67
F
6 11Right-handed alpha
Helix 68
68
F
12 14Right-handed 310
Helix 69
69
F
18 43Right-handed alpha
Helix 70
70
F
46 58Right-handed alpha
Helix 71
71
F
60 74Right-handed alpha
Helix 72
72
F
76 79Right-handed 310
Helix 73
73
F
80 93Right-handed alpha
Helix 74
74
F
95 105Right-handed alpha
Helix 75
75
F
108 114Right-handed alpha
Helix 76
76
C
14 19Right-handed alpha
Helix 77
77
C
21 25Right-handed 310
Helix 78
78
C
61 68Right-handed 310
Helix 79
79
C
86 100Right-handed alpha
Helix 80
80
C
112 116Right-handed 310
Helix 81
81
C
133 152Right-handed alpha
Helix 82
82
C
165 177Right-handed alpha
Helix 83
83
C
184 193Right-handed alpha
Helix 84
84
C
195 214Right-handed alpha
Helix 85
85
C
225 231Right-handed alpha
Helix 86
86
C
233 236Right-handed 310
Helix 87
87
C
237 256Right-handed alpha
Helix 88
88
C
258 260Right-handed 310
Helix 89
89
C
275 291Right-handed alpha
Helix 90
90
C
308 325Right-handed alpha
Helix 91
91
C
344 362Right-handed alpha
Helix 92
92
C
364 367Right-handed 310
Helix 93
93
C
375 398Right-handed alpha
Helix 94
94
C
400 407Right-handed alpha
Helix 95
95
C
461 465Right-handed 310
Helix 96
96
C
467 473Right-handed 310
Helix 97
97
C
479 483Right-handed 310
Helix 98
98
C
494 501Right-handed alpha
Helix 99
99
C
502 506Right-handed 310
Helix 100
100
C
532 546Right-handed alpha
Helix 101
101
C
593 604Right-handed alpha
Helix 102
102
C
619 624Right-handed alpha
Helix 103
103
C
632 637Right-handed 310
Helix 104
104
C
648 659Right-handed alpha
Helix 105
105
C
671 673Right-handed 310
Helix 106
106
C
674 689Right-handed alpha
Helix 107
107
C
706 713Right-handed alpha
Helix 108
108
C
724 738Right-handed alpha
Helix 109
109
G
6 11Right-handed alpha
Helix 110
110
G
12 15Right-handed 310
Helix 111
111
G
18 43Right-handed alpha
Helix 112
112
G
46 56Right-handed alpha
Helix 113
113
G
60 74Right-handed alpha
Helix 114
114
G
76 79Right-handed 310
Helix 115
115
G
80 92Right-handed alpha
Helix 116
116
G
95 104Right-handed alpha
Helix 117
117
D
14 19Right-handed alpha
Helix 118
118
D
61 68Right-handed 310
Helix 119
119
D
86 100Right-handed alpha
Helix 120
120
D
112 116Right-handed 310
Helix 121
121
D
133 152Right-handed alpha
Helix 122
122
D
165 177Right-handed alpha
Helix 123
123
D
184 193Right-handed alpha
Helix 124
124
D
195 213Right-handed alpha
Helix 125
125
D
225 231Right-handed alpha
Helix 126
126
D
233 236Right-handed 310
Helix 127
127
D
237 256Right-handed alpha
Helix 128
128
D
258 260Right-handed 310
Helix 129
129
D
275 291Right-handed alpha
Helix 130
130
D
308 326Right-handed alpha
Helix 131
131
D
335 340Right-handed 310
Helix 132
132
D
344 362Right-handed alpha
Helix 133
133
D
364 368Right-handed alpha
Helix 134
134
D
375 398Right-handed alpha
Helix 135
135
D
400 407Right-handed alpha
Helix 136
136
D
461 473Right-handed 310
Helix 137
137
D
479 483Right-handed 310
Helix 138
138
D
494 501Right-handed alpha
Helix 139
139
D
532 547Right-handed alpha
Helix 140
140
D
581 583Right-handed 310
Helix 141
141
H
6 11Right-handed alpha
Helix 142
142
H
12 15Right-handed 310
Helix 143
143
H
18 43Right-handed alpha
Helix 144
144
H
46 56Right-handed alpha
Helix 145
145
H
60 74Right-handed alpha
Helix 146
146
H
76 79Right-handed 310
Helix 147
147
H
80 91Right-handed alpha
Helix 148
148
H
95 105Right-handed alpha
Helix 149
149
H
108 114Right-handed alpha
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There are 25 sheets in PDB entry 3KP0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
A
46 48anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
73 74anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 81first strand
Strand 2
A
104 106parallel
Strand 3
A
156 160parallel
Strand 4
A
180 182parallel
Strand 5
A
216 218parallel
Strand 6
A
262 266parallel
Strand 7
A
295 298parallel
Strand 8
A
330 332parallel
Strand 9
A
77 81parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
C
369 371anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 439first strand
Strand 2
E
44 45anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
510 511first strand
Strand 2
A
578 579anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
550 561first strand
Strand 2
A
565 573anti-parallel
Strand 3
A
522 529anti-parallel
Strand 4
C
522 529anti-parallel
Strand 5
C
565 573anti-parallel
Strand 6
C
550 561anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 43first strand
Strand 2
B
46 48anti-parallel
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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 81first strand
Strand 2
B
104 106parallel
Strand 3
B
156 160parallel
Strand 4
B
180 182parallel
Strand 5
B
216 218parallel
Strand 6
B
262 266parallel
Strand 7
B
295 299parallel
Strand 8
B
330 332parallel
Strand 9
B
77 81parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 371first strand
Strand 2
D
369 371anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
438 439first strand
Strand 2
F
44 45anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
510 511first strand
Strand 2
B
578 579anti-parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
550 561first strand
Strand 2
B
565 573anti-parallel
Strand 3
B
522 529anti-parallel
Strand 4
D
522 529anti-parallel
Strand 5
D
565 573anti-parallel
Strand 6
D
550 561anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
639 642first strand
Strand 2
B
607 612parallel
Strand 3
B
663 667parallel
Strand 4
B
697 701parallel
Strand 5
B
717 719parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 43first strand
Strand 2
C
46 48anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
73 74anti-parallel
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There are 9 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 81first strand
Strand 2
C
104 106parallel
Strand 3
C
156 160parallel
Strand 4
C
180 182parallel
Strand 5
C
216 218parallel
Strand 6
C
262 266parallel
Strand 7
C
295 298parallel
Strand 8
C
330 331parallel
Strand 9
C
77 81parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
438 439first strand
Strand 2
G
44 45anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
510 511first strand
Strand 2
C
578 579anti-parallel
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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
639 642first strand
Strand 2
C
607 612parallel
Strand 3
C
663 667parallel
Strand 4
C
697 701parallel
Strand 5
C
717 719parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
41 43first strand
Strand 2
D
46 48anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
51 52first strand
Strand 2
D
73 74anti-parallel
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There are 9 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 81first strand
Strand 2
D
104 106parallel
Strand 3
D
156 160parallel
Strand 4
D
180 182parallel
Strand 5
D
216 218parallel
Strand 6
D
262 266parallel
Strand 7
D
295 298parallel
Strand 8
D
330 332parallel
Strand 9
D
77 81parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
438 439first strand
Strand 2
H
44 45anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
510 511first strand
Strand 2
D
578 579anti-parallel
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