Analysis of interatomic Contacts of Structural Units in PDB entry:
3KW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KW0 entry

There are 4 chains in PDB entry 3KW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLU 195
B
 TYR -3GLU 195
C
 LEU -4GLU 195
D
 GLY 0GLU 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 3KW0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
13 18Right-handed alpha
Helix 3
3
A
33 43Right-handed alpha
Helix 4
4
A
76 82Right-handed alpha
Helix 5
5
A
83 86Right-handed 310
Helix 6
6
A
101 103Right-handed 310
Helix 7
7
A
109 123Right-handed alpha
Helix 8
8
A
128 142Right-handed alpha
Helix 9
9
A
153 164Right-handed alpha
Helix 10
10
A
178 185Right-handed alpha
Helix 11
11
B
1 7Right-handed alpha
Helix 12
12
B
13 18Right-handed alpha
Helix 13
13
B
33 44Right-handed alpha
Helix 14
14
B
76 82Right-handed alpha
Helix 15
15
B
83 86Right-handed 310
Helix 16
16
B
101 103Right-handed 310
Helix 17
17
B
109 123Right-handed alpha
Helix 18
18
B
128 142Right-handed alpha
Helix 19
19
B
153 164Right-handed alpha
Helix 20
20
B
178 185Right-handed alpha
Helix 21
21
C
0 8Right-handed alpha
Helix 22
22
C
13 18Right-handed alpha
Helix 23
23
C
33 44Right-handed alpha
Helix 24
24
C
76 82Right-handed alpha
Helix 25
25
C
83 86Right-handed 310
Helix 26
26
C
109 123Right-handed alpha
Helix 27
27
C
128 142Right-handed alpha
Helix 28
28
C
153 164Right-handed alpha
Helix 29
29
C
178 185Right-handed alpha
Helix 30
30
D
0 7Right-handed alpha
Helix 31
31
D
13 18Right-handed alpha
Helix 32
32
D
33 44Right-handed alpha
Helix 33
33
D
76 82Right-handed alpha
Helix 34
34
D
83 86Right-handed 310
Helix 35
35
D
101 103Right-handed 310
Helix 36
36
D
109 123Right-handed alpha
Helix 37
37
D
128 142Right-handed alpha
Helix 38
38
D
153 164Right-handed alpha
Helix 39
39
D
178 185Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3KW0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
188 194parallel
Strand 3
A
92 99anti-parallel
Strand 4
A
26 31anti-parallel
Strand 5
A
49 56anti-parallel
Strand 6
A
59 66anti-parallel
Strand 7
A
70 75anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
188 194parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
26 31anti-parallel
Strand 5
B
49 56anti-parallel
Strand 6
B
59 66anti-parallel
Strand 7
B
70 75anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
188 194parallel
Strand 3
C
92 99anti-parallel
Strand 4
C
26 31anti-parallel
Strand 5
C
49 56anti-parallel
Strand 6
C
59 66anti-parallel
Strand 7
C
70 75anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 12first strand
Strand 2
D
188 194parallel
Strand 3
D
92 99anti-parallel
Strand 4
D
26 31anti-parallel
Strand 5
D
49 56anti-parallel
Strand 6
D
59 66anti-parallel
Strand 7
D
70 75anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il