Analysis of interatomic Contacts of Structural Units in PDB entry:
3KWP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KWP entry

There is 1 chain in PDB entry 3KWP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 11THR 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3KWP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 28Right-handed 310
Helix 2
2
A
29 39Right-handed alpha
Helix 3
3
A
46 57Right-handed alpha
Helix 4
4
A
70 84Right-handed alpha
Helix 5
5
A
100 113Right-handed alpha
Helix 6
6
A
124 134Right-handed alpha
Helix 7
7
A
149 159Right-handed alpha
Helix 8
8
A
172 174Right-handed 310
Helix 9
9
A
175 188Right-handed alpha
Helix 10
10
A
211 221Right-handed alpha
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There are 2 sheets in PDB entry 3KWP. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 65first strand
Strand 2
A
41 44parallel
Strand 3
A
87 91parallel
Strand 4
A
14 17parallel
Strand 5
A
117 119parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 145first strand
Strand 2
A
166 171parallel
Strand 3
A
227 231anti-parallel
Strand 4
A
192 197anti-parallel
Strand 5
A
205 210anti-parallel
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