Analysis of interatomic Contacts of Structural Units in PDB entry:
3KX6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KX6 entry

There are 4 chains in PDB entry 3KX6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 358
B
 GLN 2TYR 358
C
 VAL 3TYR 358
D
 LYS 4TYR 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 3KX6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 21Right-handed alpha
Helix 2
2
A
33 43Right-handed alpha
Helix 3
3
A
49 62Right-handed alpha
Helix 4
4
A
65 68Right-handed 310
Helix 5
5
A
76 81Right-handed alpha
Helix 6
6
A
89 97Right-handed alpha
Helix 7
7
A
126 137Right-handed alpha
Helix 8
8
A
158 179Right-handed alpha
Helix 9
9
A
196 218Right-handed alpha
Helix 10
10
A
221 225Right-handed 310
Helix 11
11
A
243 257Right-handed alpha
Helix 12
12
A
274 288Right-handed alpha
Helix 13
13
A
300 312Right-handed alpha
Helix 14
14
A
314 316Right-handed 310
Helix 15
15
A
317 336Right-handed alpha
Helix 16
16
B
6 21Right-handed alpha
Helix 17
17
B
33 44Right-handed alpha
Helix 18
18
B
49 62Right-handed alpha
Helix 19
19
B
65 68Right-handed 310
Helix 20
20
B
76 81Right-handed alpha
Helix 21
21
B
89 97Right-handed alpha
Helix 22
22
B
126 137Right-handed alpha
Helix 23
23
B
158 179Right-handed alpha
Helix 24
24
B
196 218Right-handed alpha
Helix 25
25
B
221 225Right-handed 310
Helix 26
26
B
243 257Right-handed alpha
Helix 27
27
B
274 288Right-handed alpha
Helix 28
28
B
300 312Right-handed alpha
Helix 29
29
B
314 316Right-handed 310
Helix 30
30
B
317 336Right-handed alpha
Helix 31
31
C
6 21Right-handed alpha
Helix 32
32
C
33 43Right-handed alpha
Helix 33
33
C
49 62Right-handed alpha
Helix 34
34
C
65 68Right-handed 310
Helix 35
35
C
76 81Right-handed alpha
Helix 36
36
C
89 97Right-handed alpha
Helix 37
37
C
126 137Right-handed alpha
Helix 38
38
C
158 179Right-handed alpha
Helix 39
39
C
196 218Right-handed alpha
Helix 40
40
C
221 225Right-handed 310
Helix 41
41
C
243 257Right-handed alpha
Helix 42
42
C
274 288Right-handed alpha
Helix 43
43
C
300 312Right-handed alpha
Helix 44
44
C
314 316Right-handed 310
Helix 45
45
C
317 336Right-handed alpha
Helix 46
46
D
6 21Right-handed alpha
Helix 47
47
D
33 44Right-handed alpha
Helix 48
48
D
49 62Right-handed alpha
Helix 49
49
D
65 68Right-handed 310
Helix 50
50
D
76 81Right-handed alpha
Helix 51
51
D
89 97Right-handed alpha
Helix 52
52
D
126 137Right-handed alpha
Helix 53
53
D
158 179Right-handed alpha
Helix 54
54
D
196 218Right-handed alpha
Helix 55
55
D
221 225Right-handed 310
Helix 56
56
D
243 257Right-handed alpha
Helix 57
57
D
274 288Right-handed alpha
Helix 58
58
D
300 312Right-handed alpha
Helix 59
59
D
314 316Right-handed 310
Helix 60
60
D
317 336Right-handed alpha
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There are 8 sheets in PDB entry 3KX6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
70 75parallel
Strand 3
A
100 104parallel
Strand 4
A
141 148parallel
Strand 5
A
182 189parallel
Strand 6
A
226 227parallel
Strand 7
A
265 268parallel
Strand 8
A
294 299parallel
Strand 9
A
26 30parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 111first strand
Strand 2
A
119 121anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
70 75parallel
Strand 3
B
100 104parallel
Strand 4
B
141 148parallel
Strand 5
B
182 189parallel
Strand 6
B
226 227parallel
Strand 7
B
265 268parallel
Strand 8
B
294 299parallel
Strand 9
B
26 30parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 111first strand
Strand 2
B
119 121anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 30first strand
Strand 2
C
70 75parallel
Strand 3
C
100 104parallel
Strand 4
C
141 148parallel
Strand 5
C
182 189parallel
Strand 6
C
226 227parallel
Strand 7
C
265 268parallel
Strand 8
C
294 299parallel
Strand 9
C
26 30parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 111first strand
Strand 2
C
119 121anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 30first strand
Strand 2
D
70 75parallel
Strand 3
D
100 104parallel
Strand 4
D
141 148parallel
Strand 5
D
182 189parallel
Strand 6
D
226 227parallel
Strand 7
D
265 268parallel
Strand 8
D
294 299parallel
Strand 9
D
26 30parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
109 111first strand
Strand 2
D
119 121anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il