Analysis of interatomic Contacts of Structural Units in PDB entry:
3KZG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KZG entry

There are 4 chains in PDB entry 3KZG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 18PHE 245
B
 SER 18PHE 245
C
 SER 18PHE 245
D
 SER 18PHE 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 3KZG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 57Right-handed alpha
Helix 2
2
A
67 69Right-handed 310
Helix 3
3
A
70 77Right-handed alpha
Helix 4
4
A
92 96Right-handed 310
Helix 5
5
A
120 125Right-handed 310
Helix 6
6
A
136 144Right-handed alpha
Helix 7
7
A
155 165Right-handed alpha
Helix 8
8
A
175 183Right-handed alpha
Helix 9
9
A
188 193Right-handed alpha
Helix 10
10
A
214 216Right-handed 310
Helix 11
11
A
217 234Right-handed alpha
Helix 12
12
A
235 245Right-handed alpha
Helix 13
13
B
44 58Right-handed alpha
Helix 14
14
B
67 69Right-handed 310
Helix 15
15
B
70 77Right-handed alpha
Helix 16
16
B
90 95Right-handed alpha
Helix 17
17
B
120 125Right-handed 310
Helix 18
18
B
136 144Right-handed alpha
Helix 19
19
B
155 165Right-handed alpha
Helix 20
20
B
175 181Right-handed alpha
Helix 21
21
B
214 216Right-handed 310
Helix 22
22
B
217 234Right-handed alpha
Helix 23
23
B
235 245Right-handed alpha
Helix 24
24
C
44 58Right-handed alpha
Helix 25
25
C
67 69Right-handed 310
Helix 26
26
C
70 77Right-handed alpha
Helix 27
27
C
90 95Right-handed alpha
Helix 28
28
C
120 124Right-handed 310
Helix 29
29
C
136 144Right-handed alpha
Helix 30
30
C
155 165Right-handed alpha
Helix 31
31
C
175 183Right-handed alpha
Helix 32
32
C
214 216Right-handed 310
Helix 33
33
C
217 234Right-handed alpha
Helix 34
34
C
235 245Right-handed alpha
Helix 35
35
D
44 58Right-handed alpha
Helix 36
36
D
67 69Right-handed 310
Helix 37
37
D
70 77Right-handed alpha
Helix 38
38
D
90 95Right-handed alpha
Helix 39
39
D
120 124Right-handed 310
Helix 40
40
D
136 144Right-handed alpha
Helix 41
41
D
155 162Right-handed alpha
Helix 42
42
D
175 184Right-handed alpha
Helix 43
43
D
214 216Right-handed 310
Helix 44
44
D
217 234Right-handed alpha
Helix 45
45
D
235 245Right-handed alpha
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There are 15 sheets in PDB entry 3KZG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 66first strand
Strand 2
A
20 26parallel
Strand 3
A
82 83parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
33 34anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
212 213anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
128 132parallel
Strand 3
A
170 174parallel
Strand 4
A
107 113anti-parallel
Strand 5
A
196 204anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 66first strand
Strand 2
B
20 26parallel
Strand 3
B
82 83parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
33 35anti-parallel
Strand 3
B
42 43anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 99first strand
Strand 2
B
212 213anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 153first strand
Strand 2
B
128 132parallel
Strand 3
B
170 174parallel
Strand 4
B
107 113anti-parallel
Strand 5
B
196 204anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 66first strand
Strand 2
C
20 26parallel
Strand 3
C
82 83parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 29first strand
Strand 2
C
33 35anti-parallel
Strand 3
C
42 43anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
98 99first strand
Strand 2
C
212 213anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
149 153first strand
Strand 2
C
128 132parallel
Strand 3
C
170 174parallel
Strand 4
C
107 113anti-parallel
Strand 5
C
196 204anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 66first strand
Strand 2
D
21 26parallel
Strand 3
D
82 88parallel
Strand 4
D
209 213anti-parallel
Strand 5
D
98 99anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
28 29first strand
Strand 2
D
33 35anti-parallel
Strand 3
D
42 43anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
149 153first strand
Strand 2
D
128 132parallel
Strand 3
D
170 174parallel
Strand 4
D
107 113anti-parallel
Strand 5
D
196 204anti-parallel
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