Analysis of interatomic Contacts of Structural Units in PDB entry:
3KZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KZH entry

There are 2 chains in PDB entry 3KZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4LEU 319
B
 LYS 5LEU 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3KZH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 55Right-handed alpha
Helix 2
2
A
68 82Right-handed alpha
Helix 3
3
A
116 122Right-handed 310
Helix 4
4
A
123 130Right-handed alpha
Helix 5
5
A
130 136Right-handed alpha
Helix 6
6
A
146 158Right-handed alpha
Helix 7
7
A
169 175Right-handed alpha
Helix 8
8
A
179 183Right-handed 310
Helix 9
9
A
189 198Right-handed alpha
Helix 10
10
A
203 218Right-handed alpha
Helix 11
11
A
227 229Right-handed 310
Helix 12
12
A
254 269Right-handed alpha
Helix 13
13
A
272 289Right-handed alpha
Helix 14
14
A
299 309Right-handed alpha
Helix 15
15
B
43 55Right-handed alpha
Helix 16
16
B
68 82Right-handed alpha
Helix 17
17
B
116 122Right-handed 310
Helix 18
18
B
123 130Right-handed alpha
Helix 19
19
B
130 136Right-handed alpha
Helix 20
20
B
146 158Right-handed alpha
Helix 21
21
B
169 175Right-handed alpha
Helix 22
22
B
179 183Right-handed 310
Helix 23
23
B
189 198Right-handed alpha
Helix 24
24
B
203 217Right-handed alpha
Helix 25
25
B
254 269Right-handed alpha
Helix 26
26
B
272 290Right-handed alpha
Helix 27
27
B
299 309Right-handed alpha
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There are 5 sheets in PDB entry 3KZH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
59 62parallel
Strand 3
A
9 12parallel
Strand 4
A
139 143parallel
Strand 5
A
162 166parallel
Strand 6
A
185 186parallel
Strand 7
A
221 225parallel
Strand 8
A
231 234anti-parallel
Strand 9
A
239 244anti-parallel
Strand 10
A
312 317anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 23first strand
Strand 2
A
32 42anti-parallel
Strand 3
B
109 115parallel
Strand 4
B
98 103anti-parallel
Strand 5
B
16 23parallel
Strand 6
B
33 42anti-parallel
Strand 7
A
109 115parallel
Strand 8
A
98 103anti-parallel
Strand 9
A
16 23parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
89 90parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 62first strand
Strand 2
B
9 12parallel
Strand 3
B
139 143parallel
Strand 4
B
162 166parallel
Strand 5
B
185 186parallel
Strand 6
B
221 225parallel
Strand 7
B
231 234anti-parallel
Strand 8
B
239 243anti-parallel
Strand 9
B
313 317anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 66first strand
Strand 2
B
89 91parallel
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