Analysis of interatomic Contacts of Structural Units in PDB entry:
3L0J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L0J entry

There are 2 chains in PDB entry 3L0J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 265SER 507
C
 LYS 688SER 697
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3L0J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
266 283Right-handed alpha
Helix 2
2
A
288 295Right-handed alpha
Helix 3
3
A
296 298Right-handed 310
Helix 4
4
A
301 310Right-handed alpha
Helix 5
5
A
312 338Right-handed alpha
Helix 6
6
A
340 344Right-handed 310
Helix 7
7
A
345 365Right-handed alpha
Helix 8
8
A
384 392Right-handed 310
Helix 9
9
A
393 410Right-handed alpha
Helix 10
10
A
413 426Right-handed alpha
Helix 11
11
A
435 457Right-handed alpha
Helix 12
12
A
459 463Right-handed 310
Helix 13
13
A
471 490Right-handed alpha
Helix 14
14
A
490 498Right-handed alpha
Helix 15
15
A
499 507Right-handed alpha
Helix 16
16
C
688 695Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3L0J.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 370first strand
Strand 2
A
375 378anti-parallel
Strand 3
A
381 383anti-parallel
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