Analysis of interatomic Contacts of Structural Units in PDB entry:
3L0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L0M entry

There are 2 chains in PDB entry 3L0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 313GLU 640
B
 PRO 313SER 638
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3L0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
318 362Right-handed alpha
Helix 2
2
A
364 382Right-handed alpha
Helix 3
3
A
385 390Right-handed alpha
Helix 4
4
A
391 394Right-handed 310
Helix 5
5
A
399 421Right-handed alpha
Helix 6
6
A
427 446Right-handed alpha
Helix 7
7
A
463 479Right-handed alpha
Helix 8
8
A
490 507Right-handed alpha
Helix 9
9
A
511 521Right-handed alpha
Helix 10
10
A
525 530Right-handed alpha
Helix 11
11
A
564 579Right-handed alpha
Helix 12
12
A
580 582Right-handed 310
Helix 13
13
A
584 597Right-handed alpha
Helix 14
14
A
599 606Right-handed alpha
Helix 15
15
A
609 614Right-handed alpha
Helix 16
16
A
619 635Right-handed alpha
Helix 17
17
B
318 362Right-handed alpha
Helix 18
18
B
364 382Right-handed alpha
Helix 19
19
B
385 390Right-handed alpha
Helix 20
20
B
391 394Right-handed 310
Helix 21
21
B
401 421Right-handed alpha
Helix 22
22
B
428 446Right-handed alpha
Helix 23
23
B
463 479Right-handed alpha
Helix 24
24
B
490 507Right-handed alpha
Helix 25
25
B
511 520Right-handed alpha
Helix 26
26
B
525 530Right-handed alpha
Helix 27
27
B
563 579Right-handed alpha
Helix 28
28
B
580 582Right-handed 310
Helix 29
29
B
584 597Right-handed alpha
Helix 30
30
B
609 614Right-handed alpha
Helix 31
31
B
619 637Right-handed alpha
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There are 2 sheets in PDB entry 3L0M. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 485first strand
Strand 2
A
488 489anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
484 485first strand
Strand 2
B
488 489anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il