Analysis of interatomic Contacts of Structural Units in PDB entry:
3L0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L0Z entry

There are 3 chains in PDB entry 3L0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLU 346
B
 MSE 1GLU 346
C
 MSE 1TYR 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 3L0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 15Right-handed alpha
Helix 2
2
A
30 34Right-handed 310
Helix 3
3
A
41 46Right-handed alpha
Helix 4
4
A
47 59Right-handed alpha
Helix 5
5
A
70 74Right-handed 310
Helix 6
6
A
77 89Right-handed alpha
Helix 7
7
A
117 121Right-handed 310
Helix 8
8
A
126 140Right-handed alpha
Helix 9
9
A
154 166Right-handed alpha
Helix 10
10
A
182 198Right-handed alpha
Helix 11
11
A
204 213Right-handed alpha
Helix 12
12
A
215 230Right-handed alpha
Helix 13
13
A
239 253Right-handed alpha
Helix 14
14
A
254 257Right-handed 310
Helix 15
15
A
268 272Right-handed alpha
Helix 16
16
A
277 286Right-handed alpha
Helix 17
17
A
296 300Right-handed 310
Helix 18
18
A
302 311Right-handed alpha
Helix 19
19
A
318 329Right-handed alpha
Helix 20
20
A
333 344Right-handed alpha
Helix 21
21
B
10 16Right-handed alpha
Helix 22
22
B
30 34Right-handed 310
Helix 23
23
B
47 58Right-handed alpha
Helix 24
24
B
76 88Right-handed alpha
Helix 25
25
B
117 121Right-handed 310
Helix 26
26
B
126 140Right-handed alpha
Helix 27
27
B
154 166Right-handed alpha
Helix 28
28
B
182 197Right-handed alpha
Helix 29
29
B
204 213Right-handed alpha
Helix 30
30
B
215 229Right-handed alpha
Helix 31
31
B
239 253Right-handed alpha
Helix 32
32
B
254 258Right-handed 310
Helix 33
33
B
268 273Right-handed alpha
Helix 34
34
B
277 286Right-handed alpha
Helix 35
35
B
302 307Right-handed alpha
Helix 36
36
B
318 329Right-handed alpha
Helix 37
37
B
332 345Right-handed alpha
Helix 38
38
C
10 16Right-handed alpha
Helix 39
39
C
29 34Right-handed 310
Helix 40
40
C
47 59Right-handed alpha
Helix 41
41
C
76 88Right-handed alpha
Helix 42
42
C
117 121Right-handed 310
Helix 43
43
C
126 140Right-handed alpha
Helix 44
44
C
154 166Right-handed alpha
Helix 45
45
C
182 198Right-handed alpha
Helix 46
46
C
204 213Right-handed alpha
Helix 47
47
C
215 230Right-handed alpha
Helix 48
48
C
240 253Right-handed alpha
Helix 49
49
C
268 272Right-handed alpha
Helix 50
50
C
277 286Right-handed alpha
Helix 51
51
C
296 300Right-handed 310
Helix 52
52
C
318 329Right-handed alpha
Helix 53
53
C
332 345Right-handed alpha
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There are 3 sheets in PDB entry 3L0Z. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
290 293anti-parallel
Strand 3
A
262 267parallel
Strand 4
A
234 237parallel
Strand 5
A
145 151parallel
Strand 6
A
20 26parallel
Strand 7
A
95 97parallel
Strand 8
A
108 111parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
290 293anti-parallel
Strand 3
B
262 267parallel
Strand 4
B
234 237parallel
Strand 5
B
145 151parallel
Strand 6
B
20 26parallel
Strand 7
B
95 96parallel
Strand 8
B
108 109parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 6first strand
Strand 2
C
290 293anti-parallel
Strand 3
C
262 267parallel
Strand 4
C
234 237parallel
Strand 5
C
145 151parallel
Strand 6
C
20 26parallel
Strand 7
C
95 96parallel
Strand 8
C
108 109parallel
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