Analysis of interatomic Contacts of Structural Units in PDB entry:
3L1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L1V entry

There are 2 chains in PDB entry 3L1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 24LYS 205
B
 SER 24LYS 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3L1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 49Right-handed 310
Helix 2
2
A
54 66Right-handed alpha
Helix 3
3
A
76 81Right-handed alpha
Helix 4
4
A
84 101Right-handed alpha
Helix 5
5
A
120 124Right-handed 310
Helix 6
6
A
134 145Right-handed alpha
Helix 7
7
A
157 168Right-handed alpha
Helix 8
8
A
182 189Right-handed alpha
Helix 9
9
A
195 197Right-handed 310
Helix 10
10
A
198 205Right-handed alpha
Helix 11
11
B
45 49Right-handed 310
Helix 12
12
B
54 65Right-handed alpha
Helix 13
13
B
76 81Right-handed alpha
Helix 14
14
B
84 102Right-handed alpha
Helix 15
15
B
120 124Right-handed 310
Helix 16
16
B
134 144Right-handed alpha
Helix 17
17
B
157 167Right-handed alpha
Helix 18
18
B
182 188Right-handed alpha
Helix 19
19
B
195 197Right-handed 310
Helix 20
20
B
198 205Right-handed alpha
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There are 2 sheets in PDB entry 3L1V. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
68 74parallel
Strand 3
A
27 30parallel
Strand 4
A
152 155parallel
Strand 5
A
171 175parallel
Strand 6
A
191 193parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 112first strand
Strand 2
B
68 74parallel
Strand 3
B
27 30parallel
Strand 4
B
152 155parallel
Strand 5
B
171 175parallel
Strand 6
B
191 193parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il